X-Git-Url: http://woldlab.caltech.edu/gitweb/?p=samtools.git;a=blobdiff_plain;f=bam_rmdupse.c;h=cf1b7bd7b71461938bf43033b8c452eb4a914eaf;hp=df03717232b10f9e23abe8ae0e7eefbc5a6c7d02;hb=4a17fa7e1f91b2fe04ad334a63fc2b0d5e859d8a;hpb=b27e00385f41769d03a8cca4dbd71275fc9fa906

diff --git a/bam_rmdupse.c b/bam_rmdupse.c
index df03717..cf1b7bd 100644
--- a/bam_rmdupse.c
+++ b/bam_rmdupse.c
@@ -161,7 +161,8 @@ int bam_rmdupse(int argc, char *argv[])
 	samfile_t *in, *out;
 	buffer_t *buf;
 	if (argc < 3) {
-		fprintf(stderr, "Usage: samtools rmdupse <in.bam> <out.bam>\n");
+		fprintf(stderr, "Usage: samtools rmdupse <in.bam> <out.bam>\n\n");
+		fprintf(stderr, "Note: Picard is recommended for this task.\n");
 		return 1;
 	}
 	buf = calloc(1, sizeof(buffer_t));