X-Git-Url: http://woldlab.caltech.edu/gitweb/?p=samtools.git;a=blobdiff_plain;f=debian%2Fcopyright;fp=debian%2Fcopyright;h=b0101dde70222583e8e7c739a44745649de33bb3;hp=0000000000000000000000000000000000000000;hb=b78a63d3c38fa688edd00d7b506512989c5e92cf;hpb=b27e00385f41769d03a8cca4dbd71275fc9fa906

diff --git a/debian/copyright b/debian/copyright
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+Machine-readable license summary, see ‘http://dep.debian.net/deps/dep5/’.
+
+Name      :  SAMtools
+Contact   :  SAMtools mailing list <samtools-help@lists.sourceforge.net>
+Source    :  http://downloads.sourceforge.net/sourceforge/samtools/samtools-0.1.5c.tar.bz2
+
+Copyright :  © 2008–2009, Genome Research Ltd.
+License   :  MIT
+	
+	Permission is hereby granted, free of charge, to any person obtaining a copy
+	of this software and associated documentation files (the "Software"), to deal
+	in the Software without restriction, including without limitation the rights
+	to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+	copies of the Software, and to permit persons to whom the Software is
+	furnished to do so, subject to the following conditions:
+	
+	The above copyright notice and this permission notice shall be included in
+	all copies or substantial portions of the Software.
+	
+	THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+	IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+	FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+	AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+	LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+	OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
+	THE SOFTWARE.
+
+Files     :  bgzf.*, bgzip.c
+Copyright :  © 2008 Broad Institute / Massachusetts Institute of Technology
+License   :  MIT
+
+The license of the above files have been confirmed upstream and their headers
+will be corrected in the next release. See:
+http://samtools.svn.sourceforge.net/viewvc/samtools?view=rev&revision=441
+
+
+Files     :  razf.*
+Name      :  RAZF : Random Access compressed(Z) File
+Copyright :  2008, Jue Ruan <ruanjue@gmail.com>, Heng Li <lh3@sanger.ac.uk>
+License   :  Similar to NetBSD license.
+	
+	Redistribution and use in source and binary forms, with or without
+	modification, are permitted provided that the following conditions
+	are met:
+	1. Redistributions of source code must retain the above copyright
+	   notice, this list of conditions and the following disclaimer.
+	2. Redistributions in binary form must reproduce the above copyright
+	   notice, this list of conditions and the following disclaimer in the
+	   documentation and/or other materials provided with the distribution.
+	
+	THIS SOFTWARE IS PROVIDED BY THE AUTHOR AND CONTRIBUTORS ``AS IS'' AND
+	ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
+	IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
+	ARE DISCLAIMED.  IN NO EVENT SHALL THE AUTHOR OR CONTRIBUTORS BE LIABLE
+	FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
+	DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS
+	OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION)
+	HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT
+	LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY
+	OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF
+	SUCH DAMAGE.
+
+
+Files     :  misc/md5.*
+Name      :  MD5 Message Digest Algorithm
+Copyright :  © 1990, RSA Data Security, Inc.
+License   :
+	
+	License to copy and use this software is granted provided that   
+	it is identified as the "RSA Data Security, Inc. MD5 Message     
+	Digest Algorithm" in all material mentioning or referencing this 
+	software or this function.                                       
+	                                                                 
+	License is also granted to make and use derivative works         
+	provided that such works are identified as "derived from the RSA 
+	Data Security, Inc. MD5 Message Digest Algorithm" in all         
+	material mentioning or referencing the derived work.             
+	                                                                 
+	RSA Data Security, Inc. makes no representations concerning      
+	either the merchantability of this software or the suitability   
+	of this software for any particular purpose.  It is provided "as 
+	is" without express or implied warranty of any kind.             
+	                                                                 
+	These notices must be retained in any copies of any part of this 
+	documentation and/or software.                                   
+
+The above source files for MD5 support will be replaced in the next SAMtools
+release by the public domain implementation of ‘http://www.fourmilab.ch/md5/’.