X-Git-Url: http://woldlab.caltech.edu/gitweb/?p=samtools.git;a=blobdiff_plain;f=misc%2Fsamtools.pl;fp=misc%2Fsamtools.pl;h=ce8449de622884847003ba538a2cf60c57118c99;hp=9f48b8f7586899a9b9456b3fdc09fb8a28faa3d3;hb=8d2494d1fb7cd0fa7c63be5ffba8dd1a11457522;hpb=cb12a866906ec4ac644de0e658679261c82ab098 diff --git a/misc/samtools.pl b/misc/samtools.pl index 9f48b8f..ce8449d 100755 --- a/misc/samtools.pl +++ b/misc/samtools.pl @@ -104,7 +104,6 @@ Options: -Q INT minimum RMS mapping quality for SNPs [$opts{Q}] my $len=0; if ($flt == 0) { if ($t[2] eq '*') { # an indel - # If deletion, remember the length of the deletion my ($a,$b) = split(m{/},$t[3]); my $alen = length($a) - 1;