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(parent: 3a3b721) | patch

author	Charles Plessy <plessy@debian.org>
	Tue, 13 Jul 2010 12:02:49 +0000 (21:02 +0900)
committer	Charles Plessy <plessy@debian.org>
	Tue, 13 Jul 2010 12:02:49 +0000 (21:02 +0900)
commit	cb12a866906ec4ac644de0e658679261c82ab098
tree	d5937a93ad8ea027412ff7815d15e9328d0cc55b	tree \| snapshot
parent	3a3b72190c04cb076438f5027e13fcf5ddee77be	commit \| diff

Imported Upstream version 0.1.8

42 files changed:

AUTHORS		diff \| blob \| history
ChangeLog		diff \| blob \| history
Makefile		diff \| blob \| history
Makefile.mingw		diff \| blob \| history
NEWS		diff \| blob \| history
bam.c		diff \| blob \| history
bam.h		diff \| blob \| history
bam_aux.c		diff \| blob \| history
bam_import.c		diff \| blob \| history
bam_index.c		diff \| blob \| history
bam_maqcns.c		diff \| blob \| history
bam_maqcns.h		diff \| blob \| history
bam_md.c		diff \| blob \| history
bam_pileup.c		diff \| blob \| history
bam_plcmd.c		diff \| blob \| history
bam_reheader.c	[new file with mode: 0644]	blob
bam_sort.c		diff \| blob \| history
bam_tview.c		diff \| blob \| history
bamtk.c		diff \| blob \| history
bgzf.c		diff \| blob \| history
bgzf.h		diff \| blob \| history
examples/bam2bed.c	[new file with mode: 0644]	blob
examples/toy.fa	[new file with mode: 0644]	blob
examples/toy.sam	[new file with mode: 0644]	blob
faidx.c		diff \| blob \| history
knetfile.c		diff \| blob \| history
kstring.h		diff \| blob \| history
misc/Makefile		diff \| blob \| history
misc/export2sam.pl		diff \| blob \| history
misc/sam2vcf.pl		diff \| blob \| history
misc/samtools.pl		diff \| blob \| history
misc/varfilter.py	[new file with mode: 0755]	blob
misc/wgsim.c		diff \| blob \| history
misc/wgsim_eval.pl		diff \| blob \| history
sam.c		diff \| blob \| history
sam_header.c		diff \| blob \| history
sam_view.c		diff \| blob \| history
samtools.1		diff \| blob \| history
samtools.txt		diff \| blob \| history
win32/xcurses.h	[new file with mode: 0644]	blob
win32/zconf.h	[new file with mode: 0644]	blob
win32/zlib.h	[new file with mode: 0644]	blob

woldlab customizations/backport of samtools package