projects / samtools.git / tree
| -rw-r--r-- | 782 | AUTHORS | blob | history | raw |
| -rw-r--r-- | 1085 | COPYING | blob | history | raw |
| -rw-r--r-- | 91380 | ChangeLog | blob | history | raw |
| -rw-r--r-- | 1003 | INSTALL | blob | history | raw |
| -rw-r--r-- | 1786 | Makefile | blob | history | raw |
| -rw-r--r-- | 1399 | Makefile.mingw | blob | history | raw |
| -rw-r--r-- | 8518 | NEWS | blob | history | raw |
| -rw-r--r-- | 9927 | bam.c | blob | history | raw |
| -rw-r--r-- | 22823 | bam.h | blob | history | raw |
| -rw-r--r-- | 5482 | bam_aux.c | blob | history | raw |
| -rw-r--r-- | 2803 | bam_color.c | blob | history | raw |
| -rw-r--r-- | 1064 | bam_endian.h | blob | history | raw |
| -rw-r--r-- | 15813 | bam_import.c | blob | history | raw |
| -rw-r--r-- | 16237 | bam_index.c | blob | history | raw |
| -rw-r--r-- | 4976 | bam_lpileup.c | blob | history | raw |
| -rw-r--r-- | 17531 | bam_maqcns.c | blob | history | raw |
| -rw-r--r-- | 1306 | bam_maqcns.h | blob | history | raw |
| -rw-r--r-- | 2540 | bam_mate.c | blob | history | raw |
| -rw-r--r-- | 4286 | bam_md.c | blob | history | raw |
| -rw-r--r-- | 7236 | bam_pileup.c | blob | history | raw |
| -rw-r--r-- | 13702 | bam_plcmd.c | blob | history | raw |
| -rw-r--r-- | 4288 | bam_rmdup.c | blob | history | raw |
| -rw-r--r-- | 4221 | bam_rmdupse.c | blob | history | raw |
| -rw-r--r-- | 9265 | bam_sort.c | blob | history | raw |
| -rw-r--r-- | 2688 | bam_stat.c | blob | history | raw |
| -rw-r--r-- | 12554 | bam_tview.c | blob | history | raw |
| -rw-r--r-- | 4810 | bamtk.c | blob | history | raw |
| -rw-r--r-- | 18829 | bgzf.c | blob | history | raw |
| -rw-r--r-- | 3917 | bgzf.h | blob | history | raw |
| -rw-r--r-- | 5786 | bgzip.c | blob | history | raw |
| drwxr-xr-x | - | debian | tree | history |
| drwxr-xr-x | - | examples | tree | history |
| -rw-r--r-- | 7858 | faidx.c | blob | history | raw |
| -rw-r--r-- | 2434 | faidx.h | blob | history | raw |
| -rw-r--r-- | 5931 | glf.c | blob | history | raw |
| -rw-r--r-- | 1799 | glf.h | blob | history | raw |
| -rw-r--r-- | 16522 | khash.h | blob | history | raw |
| -rw-r--r-- | 16715 | knetfile.c | blob | history | raw |
| -rw-r--r-- | 1572 | knetfile.h | blob | history | raw |
| -rw-r--r-- | 8108 | kseq.h | blob | history | raw |
| -rw-r--r-- | 9672 | ksort.h | blob | history | raw |
| -rw-r--r-- | 4009 | kstring.c | blob | history | raw |
| -rw-r--r-- | 1587 | kstring.h | blob | history | raw |
| drwxr-xr-x | - | misc | tree | history |
| -rw-r--r-- | 20585 | razf.c | blob | history | raw |
| -rw-r--r-- | 3991 | razf.h | blob | history | raw |
| -rw-r--r-- | 4098 | razip.c | blob | history | raw |
| -rw-r--r-- | 5528 | sam.c | blob | history | raw |
| -rw-r--r-- | 2625 | sam.h | blob | history | raw |
| -rw-r--r-- | 7717 | sam_view.c | blob | history | raw |
| -rw-r--r-- | 12244 | samtools.1 | blob | history | raw |
| -rw-r--r-- | 16985 | samtools.txt | blob | history | raw |