X-Git-Url: http://woldlab.caltech.edu/gitweb/?p=tabix.git;a=blobdiff_plain;f=TabixReader.java;fp=TabixReader.java;h=0d359c5968ef218020b22bf3394fb049da16fcf6;hp=5874202581ee8bf72f4b0c3917a743f59c40c03e;hb=f96c23c6f65057130fab79f8b7387e0010366809;hpb=3350fbbd1e91bc868206cb722c4382979c6395a7

diff --git a/TabixReader.java b/TabixReader.java
index 5874202..0d359c5 100644
--- a/TabixReader.java
+++ b/TabixReader.java
@@ -231,7 +231,7 @@ public class TabixReader
 			if (col == mSc) {
 				intv.tid = chr2tid(s.substring(beg, end));
 			} else if (col == mBc) {
-				intv.beg = intv.end = Integer.parseInt(s.substring(beg, end));
+				intv.beg = intv.end = Integer.parseInt(s.substring(beg, end==-1?s.length():end));
 				if ((mPreset&0x10000) != 0) ++intv.end;
 				else --intv.beg;
 				if (intv.beg < 0) intv.beg = 0;