X-Git-Url: http://woldlab.caltech.edu/gitweb/?p=tabix.git;a=blobdiff_plain;f=tabix.1;h=1bd9533d93577db59b6d97e8fcf912637c56b27d;hp=26578296f04f545c115a2edbd3a26eb5536c6ecc;hb=HEAD;hpb=c70c92b7a385548d8e670638a93a083401f49e4d diff --git a/tabix.1 b/tabix.1 index 2657829..1bd9533 100644 --- a/tabix.1 +++ b/tabix.1 @@ -1,4 +1,4 @@ -.TH tabix 1 "5 May 2010" "tabix-0.1.5" "Bioinformatics tools" +.TH tabix 1 "11 May 2010" "tabix-0.2.0" "Bioinformatics tools" .SH NAME .PP bgzip - Block compression/decompression utility @@ -7,7 +7,7 @@ tabix - Generic indexer for TAB-delimited genome position files .SH SYNOPSIS .PP .B bgzip -.RB [ \-cdh ] +.RB [ \-cdhB ] .RB [ \-b .IR virtualOffset ] .RB [ \-s @@ -82,6 +82,14 @@ Skip lines started with character CHAR. [#] Specify that the position in the data file is 0-based (e.g. UCSC files) rather than 1-based. .TP +.B -h +Print the header/meta lines. +.TP +.B -B +The second argument is a BED file. When this option is in use, the input +file may not be sorted or indexed. The entire input will be read sequentially. Nonetheless, +with this option, the format of the input must be specificed correctly on the command line. +.TP .B -f Force to overwrite the index file if it is present. .TP