X-Git-Url: http://woldlab.caltech.edu/gitweb/?p=tabix.git;a=blobdiff_plain;f=tabix.h;h=7b4497a35676b494d8bf1c600601b2945545b8b9;hp=95a849158feded5acfc134a1ddef3577546890ad;hb=HEAD;hpb=36e5c2e93cc97d22f8b33768602d511697fa1adf

diff --git a/tabix.h b/tabix.h
index 95a8491..7b4497a 100644
--- a/tabix.h
+++ b/tabix.h
@@ -58,6 +58,11 @@ typedef struct {
 	int32_t meta_char, line_skip;
 } ti_conf_t;
 
+typedef struct {
+	int beg, end;
+	char *ss, *se;
+} ti_interval_t;
+
 extern ti_conf_t ti_conf_gff, ti_conf_bed, ti_conf_psltbl, ti_conf_vcf, ti_conf_sam; // preset
 
 #ifdef __cplusplus
@@ -73,6 +78,7 @@ extern "C" {
 	void ti_close(tabix_t *t);
 	ti_iter_t ti_query(tabix_t *t, const char *name, int beg, int end);
 	ti_iter_t ti_queryi(tabix_t *t, int tid, int beg, int end);
+	ti_iter_t ti_querys(tabix_t *t, const char *reg);
 	const char *ti_read(tabix_t *t, ti_iter_t iter, int *len);
 
 	/* Destroy the iterator */
@@ -119,6 +125,9 @@ extern "C" {
 	/* Get the data line pointed by the iterator and iterate to the next record. */
 	const char *ti_iter_read(BGZF *fp, ti_iter_t iter, int *len);
 
+	const ti_conf_t *ti_get_conf(ti_index_t *idx);
+	int ti_get_intv(const ti_conf_t *conf, int len, char *line, ti_interval_t *intv);
+
 	/*******************
 	 * Deprecated APIs *
 	 *******************/