Protein Families	PC-57 Value	ProbeId	Name	Aliases	Description	Function	Protein Families	
Major facilitator superfamily (IPR007114);Organic anion transporter polypeptide (OATP), C-terminal (IPR004157);Organic anion transporter polypeptide (OATP), N-terminal (IPR004156)	5.44387095048	222071_s_at	SLCO4C1	OATP-H;OATP-M1;OATP4C1;OATPX;PRO2176;SLC21A20;SLCO4C1	solute carrier organic anion transporter family, member 4C1	transport (GO:0006810);transporter activity (GO:0005215)	Major facilitator superfamily (IPR007114);Organic anion transporter polypeptide (OATP), C-terminal (IPR004157);Organic anion transporter polypeptide (OATP), N-terminal (IPR004156)	
Fibronectin, type III (IPR003961);Fibronectin, type III subdomain (IPR003962);Fibronectin, type III-like fold (IPR008957);Immunoglobulin C-2 type (IPR003598);Immunoglobulin subtype (IPR003599);Immunoglobulin-like (IPR007110);Immunoglobulin/major histocompatibility complex (IPR003006);Protein tyrosine phosphatase, catalytic region (IPR003595);Tyrosine specific protein phosphatase (IPR000242);Tyrosine specific protein phosphatase and dual specificity protein phosphatase (IPR000387)	4.34964641194	214043_at	PTPRD	HPTP;HPTP-DELTA;HPTPD;PTPD;PTPRD;R-PTP-DELTA	protein tyrosine phosphatase, receptor type, D	hydrolase activity (GO:0016787);phosphate metabolism (GO:0006796);prenylated protein tyrosine phosphatase activity (GO:0004727);protein amino acid dephosphorylation (GO:0006470);receptor activity (GO:0004872);transmembrane receptor protein tyrosine phosphatase activity (GO:0005001);transmembrane receptor protein tyrosine phosphatase signaling pathway (GO:0007185)	Fibronectin, type III (IPR003961);Fibronectin, type III subdomain (IPR003962);Fibronectin, type III-like fold (IPR008957);Immunoglobulin C-2 type (IPR003598);Immunoglobulin subtype (IPR003599);Immunoglobulin-like (IPR007110);Immunoglobulin/major histocompatibility complex (IPR003006);Protein tyrosine phosphatase, catalytic region (IPR003595);Tyrosine specific protein phosphatase (IPR000242);Tyrosine specific protein phosphatase and dual specificity protein phosphatase (IPR000387)	
Machado-Joseph disease protein MJD (IPR006155)	4.20949743965	gnf1h07125_at	SBBI54	SBBI54	hypothetical transmembrane protein SBBI54	None	Machado-Joseph disease protein MJD (IPR006155)	
Peptidase C13, legumain (IPR001096)	4.09558838313	201212_at	LGMN	LGMN;LGMN1;PRSC1	legumain	hydrolase activity (GO:0016787);legumain activity (GO:0001509);proteolysis and peptidolysis (GO:0006508)	Peptidase C13, legumain (IPR001096)	
Glucose/ribitol dehydrogenase (IPR002347);Short-chain dehydrogenase/reductase SDR (IPR002198)	4.0642940589	gnf1h08075_at	RDH12	FLJ30273;RDH12	retinol dehydrogenase 12 (all-trans and 9-cis)	metabolism (GO:0008152);oxidoreductase activity (GO:0016491);retinol dehydrogenase activity (GO:0004745);retinol metabolism (GO:0042572);visual perception (GO:0007601)	Glucose/ribitol dehydrogenase (IPR002347);Short-chain dehydrogenase/reductase SDR (IPR002198)	
Animal haem peroxidase (IPR002007);EGF-like domain (IPR006209);EGF-like domain, subtype 2 (IPR000742);Haem peroxidase (IPR010255);Haem peroxidase, plant/fungal/bacterial (IPR002016);Type I EGF (IPR006210)	4.06080424888	204748_at	PTGS2	COX-2;COX2;PGG/HS;PGHS-2;PHS-2;PTGS2;hCox-2	prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase)	cell motility (GO:0006928);cyclooxygenase pathway (GO:0019371);inflammatory response (GO:0006954);oxidoreductase activity (GO:0016491);oxidoreductase activity\, acting on single donors with incorporation of molecular oxygen\, incorporation of two atoms of oxygen (GO:0016702);peroxidase activity (GO:0004601);peroxidase reaction (GO:0006804);physiological process (GO:0007582);prostaglandin biosynthesis (GO:0001516);prostaglandin metabolism (GO:0006693);prostaglandin-endoperoxide synthase activity (GO:0004666);response to oxidative stress (GO:0006979)	Animal haem peroxidase (IPR002007);EGF-like domain (IPR006209);EGF-like domain, subtype 2 (IPR000742);Haem peroxidase (IPR010255);Haem peroxidase, plant/fungal/bacterial (IPR002016);Type I EGF (IPR006210)	
None	4.01249983224	gnf1h04569_s_at	gnf1h04569_s_at	None	None	None	None	
PAK-box/P21-Rho-binding (IPR000095);Protein kinase (IPR000719);Serine/threonine protein kinase (IPR002290);Tyrosine protein kinase (IPR001245)	3.91518745876	210721_s_at	PAK7	KIAA1264;MGC26232;PAK5;PAK7	p21(CDKN1A)-activated kinase 7	ATP binding (GO:0005524);protein amino acid phosphorylation (GO:0006468);protein kinase activity (GO:0004672);protein serine/threonine kinase activity (GO:0004674);protein-tyrosine kinase activity (GO:0004713);transferase activity (GO:0016740)	PAK-box/P21-Rho-binding (IPR000095);Protein kinase (IPR000719);Serine/threonine protein kinase (IPR002290);Tyrosine protein kinase (IPR001245)	
None	3.87984509405	gnf1h03371_s_at	gnf1h03371_s_at	None	None	None	None	
Amelogenin (IPR004116);Proline-rich region (IPR000694)	3.81402774944	208220_x_at	AMELY	AMELY;AMGL;AMGY	amelogenin, Y-linked	development (GO:0007275);extracellular matrix structural constituent (GO:0005201);odontogenesis (GO:0042476);structural constituent of tooth enamel (GO:0030345)	Amelogenin (IPR004116);Proline-rich region (IPR000694)	
B302, (SPRY)-like (IPR001870);Bipartite nuclear localization signal (IPR001472);Butyrophylin-like (IPR003879);Fibronectin, type III (IPR003961);Fibronectin, type III-like fold (IPR008957);Zn-finger, B-box (IPR000315);Zn-finger, RING (IPR001841)	-4.15983965525	219736_at	TRIM36	RBCC728;RNF98;TRIM36	tripartite motif-containing 36	zinc ion binding (GO:0008270)	B302, (SPRY)-like (IPR001870);Bipartite nuclear localization signal (IPR001472);Butyrophylin-like (IPR003879);Fibronectin, type III (IPR003961);Fibronectin, type III-like fold (IPR008957);Zn-finger, B-box (IPR000315);Zn-finger, RING (IPR001841)	
Bipartite nuclear localization signal (IPR001472);CARD interaction domain (IPR001315);Caspase-1, p10 (IPR002138);Caspase-1, p20 (IPR001309);Peptidase C14, caspase precursor, p45 (IPR002398)	-4.16815602087	207500_at	CASP5	CASP5;ICE(rel)III;ICEREL-III;ICErel-III;ICH-3	caspase 5, apoptosis-related cysteine protease	apoptosis (GO:0006915);apoptosis regulator activity (GO:0016329);caspase activity (GO:0004199);caspase activity (GO:0030693);cysteine-type peptidase activity (GO:0008234);hydrolase activity (GO:0016787);protein binding (GO:0005515);proteolysis and peptidolysis (GO:0006508)	Bipartite nuclear localization signal (IPR001472);CARD interaction domain (IPR001315);Caspase-1, p10 (IPR002138);Caspase-1, p20 (IPR001309);Peptidase C14, caspase precursor, p45 (IPR002398)	
None	-4.18578136164	gnf1h05113_s_at	gnf1h05113_s_at	None	None	None	None	
Bipartite nuclear localization signal (IPR001472);Proline-rich region (IPR000694);Transcription elongation factor S-II, central region (IPR003618);Zn-finger-like, PHD finger (IPR001965)	-4.24143577829	217953_at	PHF3	KIAA0244;PHF3	PHD finger protein 3	DNA binding (GO:0003677);transcription (GO:0006350)	Bipartite nuclear localization signal (IPR001472);Proline-rich region (IPR000694);Transcription elongation factor S-II, central region (IPR003618);Zn-finger-like, PHD finger (IPR001965)	
None	-4.25109296651	216068_at	Hs.208769	None	MRNA; cDNA DKFZp434N021 (from clone DKFZp434N021)	None	None	
Growth factor, cystine knot (IPR002400);Transforming growth factor beta (IPR001839);Transforming growth factor beta (TGFb), N-terminal (IPR001111);Transforming growth factor beta TGFb (IPR003911);Transforming growth factor, beta 2 (IPR003940);Transforming growth factor, beta 3 (IPR003941)	-4.27072615838	209908_s_at	TGFB2	TGFB2	transforming growth factor, beta 2	cell growth (GO:0016049);cell proliferation (GO:0008283);cell-cell signaling (GO:0007267);growth (GO:0040007);signal transduction (GO:0007165);transforming growth factor beta receptor binding (GO:0005160)	Growth factor, cystine knot (IPR002400);Transforming growth factor beta (IPR001839);Transforming growth factor beta (TGFb), N-terminal (IPR001111);Transforming growth factor beta TGFb (IPR003911);Transforming growth factor, beta 2 (IPR003940);Transforming growth factor, beta 3 (IPR003941)	
Bipartite nuclear localization signal (IPR001472);Ca2+/Na+ channel, pore region (IPR001682);Cation (not K+) channel, TM region (IPR002111);Cation channel, non-ligand gated (IPR005820);IQ calmodulin-binding region (IPR000048);Ion transport protein (IPR005821);Na+ channel (IPR001696);Polycystic kidney disease type 2 protein (IPR003915);Sodium ion transport-associated (IPR010526)	-4.29332828574	206950_at	SCN9A	NE-NA;NENA;PN1;SCN9A	sodium channel, voltage-gated, type IX, alpha	cation channel activity (GO:0005261);cation transport (GO:0006812);sodium ion transport (GO:0006814);voltage-gated sodium channel activity (GO:0005248)	Bipartite nuclear localization signal (IPR001472);Ca2+/Na+ channel, pore region (IPR001682);Cation (not K+) channel, TM region (IPR002111);Cation channel, non-ligand gated (IPR005820);IQ calmodulin-binding region (IPR000048);Ion transport protein (IPR005821);Na+ channel (IPR001696);Polycystic kidney disease type 2 protein (IPR003915);Sodium ion transport-associated (IPR010526)	
Zn-finger, RING (IPR001841)	-4.34425861227	221195_at	LOC51136	LOC51136	PTD016 protein	None	Zn-finger, RING (IPR001841)	
None	-4.50640579109	gnf1h07397_s_at	THOC2	THO2;THOC2	THO complex 2	None	None	
Microfibril-associated glycoprotein (IPR008673)	-4.99226185083	213764_s_at	MFAP5	MAGP2;MFAP5;MP25	microfibrillar associated protein 5	extracellular matrix structural constituent (GO:0005201)	Microfibril-associated glycoprotein (IPR008673)