15808_ACAGTG_L001_R1_001.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	15808_ACAGTG_L001_R1_001.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4000000
Sequences flagged as poor quality	0
Sequence length	50
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGAAACGAAACTGGAAACCGACCGCCGCCATATCAGAAATCGCATTCA	7272	0.1818	No Hit
CGCCGCCATATCAGAAATCGCATTCATGAAATCAACACACAGCTTTCCAC	5734	0.14335	No Hit
GTTGATTTCATGAATGCGATTTCTGATATGGCGGCGGTCGGTTTCCAGTT	5044	0.1261	No Hit
GTCCGCACTAAGTTCGGCATCAATATGGTGACCTCCCGGGAGCGGGGGAC	4824	0.1206	No Hit
CCCGGGGAAACGAAACTGGAAACCGACCGCCGCCATATCAGAAATCGCAT	4124	0.1031	No Hit
CGGGGTCTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGC	4122	0.10304999999999999	No Hit
GGGACATTCAAATGAGCATCCTAGTCACCGCGTTTAAAATGAACCTGCCG	4037	0.100925	No Hit
GTGGCTATTCACAGGCGCGATCCCACTACTGATCAGCACGGGAGTTTTGA	4018	0.10045	No Hit
GTCGGTTTAGCTGAGATTGCACCGTTGTTATAATCGACCCGGGCTGCGAC	4018	0.10045	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CTTTTT	9985	15.034979	1
TCGTAA	2005	11.687644	2
CGTAAC	1845	11.113556	3
AATCCG	1550	10.884254	44
CGGCCT	1705	10.708714	1
GAATTC	3285	10.494556	4
TACCAT	1970	10.162319	9
TTTGGC	1595	10.154595	7
TAGTTA	2840	9.900583	9
GGATCC	1475	9.627759	1
CCGGTA	1745	9.539056	12
TTACCC	1315	9.408189	34
AGTTAC	1845	9.387792	10
GTAACC	2255	9.292753	4
CACGTC	950	9.23443	14
CTTACC	1405	9.1257305	33
CATGCA	2245	9.01769	13
GGCTAA	1705	8.971264	10
ACTTAG	3480	8.7316265	6
AGCTAG	2245	8.722551	6