qui/PathWindow.cxx

   1 #include "qui/PathWindow.h"
   2
   3 #include <QAction>
   4 #include <QDir>
   5 #include <QFileDialog>
   6 #include <QIcon>
   7 #include <QMenuBar>
   8 #include <QMessageBox>
   9 #include <QStatusBar>
  10 #include <QString>
  11 #include <QToolBar>
  12
  13 #include "qui/PathScene.h"
  14 #include "qui/ThresholdWidget.h"
  15
  16 #include <iostream>
  17
  18 PathWindow::PathWindow(QWidget *) :
  19   closeAction(0) // initialize one of the pointers to null as a saftey flag
  20 {
  21   setupActions();
  22   setupMainMenu();
  23
  24   scene = new PathScene(10000, 10, this);
  25   setCentralWidget(scene);
  26
  27   mussaViewTB = new QToolBar("Path Views");
  28   mussaViewTB->addAction(toggleMotifsAction);
  29
  30   ThresholdWidget *threshold = new ThresholdWidget;
  31   threshold->setRange(21, 30);
  32   scene->setClipPlane(21);
  33   connect(threshold, SIGNAL(thresholdChanged(int)),
  34           scene, SLOT(setClipPlane(int)));
  35   mussaViewTB->addWidget(threshold);
  36   addToolBar(mussaViewTB);
  37
  38   statusBar()->showMessage("Welcome to mussa", 2000);
  39 }
  40
  41 void PathWindow::setupActions()
  42 {
  43   // we really don't want to run this more than once.
  44   assert (closeAction == 0);
  45
  46   // the ever popular about box
  47   aboutAction = new QAction(tr("&About"), this);
  48   connect(aboutAction, SIGNAL(triggered()), this, SLOT(about()));
  49
  50   // add exit
  51   closeAction = new QAction(tr("&Close"), this);
  52   closeAction->setStatusTip(tr("Close this window"));
  53   connect(closeAction, SIGNAL(triggered()), this, SLOT(close()));
  54
  55   createNewAnalysisAction = new QAction(tr("Define Analysis"), this);
  56   connect(createNewAnalysisAction, SIGNAL(triggered()),
  57           this, SLOT(createNewAnalysis()));
  58
  59   createSubAnalysisAction = new QAction(tr("Define SubAnalysis"), this);
  60   connect(createSubAnalysisAction, SIGNAL(triggered()),
  61           this, SLOT(createSubAnalysis()));
  62
  63   loadMotifListAction = new QAction(tr("Load Motif List"), this);
  64   connect(loadMotifListAction, SIGNAL(triggered()),
  65           this, SLOT(loadMotifList()));
  66
  67   loadMupaAction = new QAction(tr("Load Mussa Parameters"), this);
  68   connect(loadMupaAction, SIGNAL(triggered()),
  69           this, SLOT(loadMupa()));
  70
  71   loadSavedAnalysisAction = new QAction(tr("Load &Analysis"), this);
  72   connect(loadSavedAnalysisAction, SIGNAL(triggered()),
  73           this, SLOT(loadSavedAnalysis()));
  74
  75   saveMotifListAction = new QAction(tr("Save Motifs"), this);
  76   connect(saveMotifListAction, SIGNAL(triggered()),
  77           this, SLOT(saveMotifList()));
  78
  79   showMussaViewToolbarAction = new QAction(tr("Show Toolbar"), this);
  80   connect(showMussaViewToolbarAction, SIGNAL(triggered()),
  81           this, SLOT(showMussaToolbar()));
  82   showMussaViewToolbarAction->setCheckable(true);
  83   showMussaViewToolbarAction->setChecked(true);
  84
  85   toggleMotifsAction = new QAction(tr("Toggle Motifs"), this);
  86   connect(toggleMotifsAction, SIGNAL(triggered()),
  87           this, SLOT(toggleMotifs()));
  88
  89   toggleMotifsAction->setCheckable(true);
  90   toggleMotifsAction->setIcon(QIcon("icons/motif_icon.png"));
  91 }
  92
  93 void PathWindow::setupMainMenu()
  94 {
  95   // we need to run setupActions first
  96   assert (closeAction != 0);
  97
  98   QMenu *newMenu;
  99   newMenu = menuBar()->addMenu(tr("&File"));
 100   newMenu->addAction(createNewAnalysisAction);
 101   newMenu->addAction(loadMupaAction);
 102   newMenu->addAction(loadSavedAnalysisAction);
 103   newMenu->addAction(createSubAnalysisAction);
 104   newMenu->addSeparator();
 105   newMenu->addAction(loadMotifListAction);
 106   newMenu->addAction(saveMotifListAction);
 107   newMenu->addSeparator();
 108   newMenu->addAction(closeAction);
 109
 110   newMenu = menuBar()->addMenu(tr("&View"));
 111   newMenu->addAction(showMussaViewToolbarAction);
 112
 113   newMenu = menuBar()->addMenu(tr("&Help"));
 114   newMenu->addAction(aboutAction);
 115 }
 116
 117 void PathWindow::about()
 118 {
 119   QMessageBox::about(this, tr("About mussa"),
 120       tr("Welcome to Multiple Species Sequence Analysis\n"
 121          "(c) 2005-2006 California Institute of Technology\n"
 122          "Tristan De Buysscher, Diane Trout\n"));
 123 }
 124
 125 void PathWindow::createNewAnalysis()
 126 {
 127   NotImplementedBox();
 128 }
 129
 130 void PathWindow::createSubAnalysis()
 131 {
 132   NotImplementedBox();
 133 }
 134
 135 void PathWindow::loadMotifList()
 136 {
 137   NotImplementedBox();
 138 }
 139
 140 void PathWindow::loadMupa()
 141 {
 142   QString caption("Load a mussa parameter file");
 143   QString filter("Mussa Parameters (*.mupa)");
 144   QString mupa_path = QFileDialog::getOpenFileName(this,
 145                                                    caption,
 146                                                    QDir::currentPath(),
 147                                                    filter);
 148   mussaAnalysis.load_mupa_file(mupa_path.toStdString());
 149 }
 150
 151 void PathWindow::loadSavedAnalysis()
 152 {
 153   NotImplementedBox();
 154 }
 155
 156 void PathWindow::saveMotifList()
 157 {
 158   NotImplementedBox();
 159 }
 160
 161 void PathWindow::showMussaToolbar()
 162 {
 163   std::clog << "isVis?" << mussaViewTB->isVisible() <<std::endl;
 164   if (mussaViewTB->isVisible())
 165     mussaViewTB->hide();
 166   else
 167     mussaViewTB->show();
 168   std::clog << "isVis?" << mussaViewTB->isVisible() <<std::endl;
 169 }
 170
 171 void PathWindow::toggleMotifs()
 172 {
 173   NotImplementedBox();
 174 }
 175
 176 void PathWindow::NotImplementedBox()
 177 {
 178   QMessageBox::warning(this, QObject::tr("mussa"), QObject::tr("Not implemented yet"));
 179 }
 180
 181