-#include "mussa_gui_conn_window.hh"
+// This file is part of the Mussa source distribution.
+// http://mussa.caltech.edu/
+// Contact author: Tristan De Buysscher, tristan@caltech.edu
-char
-parse_args(int argc, char **argv, string *a_file_path, int *window,
- int *threshold)
-{
- int i;
- string an_arg;
- char run_mode;
-
- *window = 0;
- *threshold = 0;
+// This program and all associated source code files are Copyright (C) 2005
+// the California Institute of Technology, Pasadena, CA, 91125 USA. It is
+// under the GNU Public License; please see the included LICENSE.txt
+// file for more information, or contact Tristan directly.
- // minimal arg reading structure, not very robust to errors
+#include "mussa_gui_conn_window.hh"
- run_mode = 'g';
- i = 1;
- while (i < argc)
- {
- an_arg = * ++argv;
- i++;
- if (an_arg == "-v")
- {
- *a_file_path = * ++argv;
- i++;
- run_mode = 'v';
- }
- else if (an_arg == "-n")
- {
- *a_file_path = * ++argv;
- i++;
- run_mode = 'n';
- }
- else if (an_arg == "-w")
- {
- *window = atoi(* ++argv);
- i++;
- }
- else if (an_arg == "-t")
- {
- *threshold = atoi(* ++argv);
- i++;
- }
- else
- {
- *a_file_path = an_arg;
- run_mode = 'f';
- }
- }
- return run_mode;
-}
+char
+parse_args(int argc, char **argv, string *a_file_path, int *window,
+ int *threshold, char *ana_mode, float *ent_thres);
int main(int argc, char **argv)
string a_file_path;
char * picked_file;
int window, threshold;
- char run_mode;
+ float ent_thres;
+ char run_mode, ana_mode;
int x_max=1000;
int y_max=500;
string err_msg;
+
err_msg = "";
// yeah, its horrible to be passing these by reference, but I just don't see
// any other way without making parse_args part of MussaClass, which just
// seems wrong (args are after all, an io type thing, and the gui only mode
// will have it own way as well...
- run_mode = parse_args(argc, argv, &a_file_path, &window, &threshold);
+ run_mode = parse_args(argc, argv, &a_file_path, &window, &threshold,
+ &ana_mode, &ent_thres);
- if ((run_mode == 'f') || (run_mode == 'n'))
- err_msg = an_analysis.analyze(a_file_path, window, threshold);
- //an_overlord.do_analysis();
+ cout << "mussa: run mode = " << run_mode;
+ cout << "\tfile_path = "<< a_file_path << endl;
+ cout << "mussa: ent_thres = " << ent_thres << endl;
- if (run_mode == 'v')
- err_msg = an_analysis.load(a_file_path);
+ // if no error from parse args (run_mode = 'e', ie error), run in proper mode
+ if (run_mode != 'e')
+ {
+ if ((run_mode == 'f') || (run_mode == 'n'))
+ {
+ err_msg = an_analysis.load_mupa_file(a_file_path);
+ err_msg = an_analysis.analyze(window, threshold, ana_mode, ent_thres);
+ //an_overlord.do_analysis();
+ }
+
+ if (run_mode == 'v')
+ err_msg = an_analysis.load(a_file_path);
//an_overlord.get_analysis();
- // no longer needed, but still semi-useful reality check...
- if (run_mode == 'g')
- {
- cout << "GTV - All Gui, All the Time\n";
- }
+ // no longer needed, but still semi-useful reality check...
+ if (run_mode == 'g')
+ {
+ cout << "GTV - All Gui, All the Time\n";
+ }
- if (err_msg == "")
- {
- if ((run_mode == 'f') || (run_mode == 'v') || (run_mode == 'g'))
+ if (err_msg == "")
{
- //an_overlord.spawnConnView(1000,500);
- ConnWindow *a_conn_win = new ConnWindow(x_max, y_max, "Mussa");
+ if ((run_mode == 'f') || (run_mode == 'v') || (run_mode == 'g'))
+ {
+ //an_overlord.spawnConnView(1000,500);
+ ConnWindow *a_conn_win = new ConnWindow(x_max, y_max, "Mussa");
- // we have an analysis already if in these 2 modes
- if ((run_mode == 'f') || (run_mode == 'v'))
- a_conn_win->add_ana(&an_analysis);
+ // we have an analysis already if in these 2 modes
+ if ((run_mode == 'f') || (run_mode == 'v'))
+ a_conn_win->add_ana(&an_analysis);
- Fl::run();
+ Fl::run();
+ }
}
+ else
+ cout << err_msg << endl;
+ }
+}
+
+
+// minimal arg reading function, not very robust to errors
+char
+parse_args(int argc, char **argv, string *a_file_path, int *window,
+ int *threshold, char *ana_mode, float *ent_thres)
+{
+ int i, else_i;
+ string an_arg;
+ char run_mode;
+
+ // initialize these to 0 as flag if they are not changed
+ *window = 0;
+ *threshold = 0;
+ *ent_thres = 0.0;
+ run_mode = 'e'; //error default if no run mode set implicitly or explicitly
+ *ana_mode = 't'; // default to transitivie analyses mode
+
+
+
+ // no args means gui only mode
+ if (argc == 1)
+ run_mode = 'g';
+ // 1 arg means its a mupa file and run in full mode
+ /*
+ else if (argc == 2)
+ {
}
+ */
else
- cout << err_msg << endl;
+ {
+ else_i = 0;
+ i = 1;
+ while (i < argc)
+ {
+ an_arg = * ++argv;
+ i++;
+
+ // see what alternate mode the user wants to run in
+ if (an_arg == "-m")
+ {
+ an_arg = * ++argv;
+ i++;
+ if ( (an_arg == "v") || (an_arg == "n") ) //only 2 valid modes so far
+ run_mode = an_arg[0];
+ else
+ {
+ cout << "Error: \'" << an_arg;
+ cout << "\' is not a valid analysis mode for -a argument" << endl;
+ run_mode = 'e';
+ }
+ *a_file_path = * ++argv;
+ i++;
+ }
+ // alternate analyses modes
+ else if (an_arg == "-a")
+ {
+ an_arg = * ++argv;
+ i++;
+ // t = transitive, r = radial, e = entropy
+ if ( (an_arg == "t") || (an_arg == "r") || (an_arg == "e") )
+ *ana_mode = an_arg[0];
+ else
+ {
+ cout << "Error: \'" << an_arg;
+ cout << "\' is not a valid run mode for -m argument" << endl;
+ run_mode = 'e';
+ }
+
+ }
+ else if (an_arg == "-w") // alternate window size arg
+ {
+ *window = atoi(* ++argv);
+ i++;
+ }
+ else if (an_arg == "-t") // alternate threshold arg
+ {
+ *threshold = atoi(* ++argv);
+ i++;
+ }
+ else if (an_arg == "-et") // alternate entropy threshold arg
+ {
+ *ent_thres = atof(* ++argv);
+ i++;
+ }
+ else
+ {
+ if (else_i == 0)
+ {
+ *a_file_path = an_arg;
+ run_mode = 'f';
+ else_i++;
+ }
+ else
+ {
+ //cout << "Error, unknown arg: \'" << an_arg << "\'" << endl;
+ cout << "Error, too many filenames: \'" << an_arg << "\'" << endl;
+ run_mode == 'e';
+ }
+ }
+ }
+ }
+
+ return run_mode;
}
+
/*
cout << "fee\n";
cout << "fie\n";