changing the set of links does need to redraw

[mussa.git] / qui / MussaAlignedWindow.cpp

diff --git a/qui/MussaAlignedWindow.cpp b/qui/MussaAlignedWindow.cpp
index e3735bd2282245a0a6d7313a23cf7f33ea747bf5..4419474b17e98511641198c5add6ff3e5b0d45d3 100644 (file)
--- a/qui/MussaAlignedWindow.cpp
+++ b/qui/MussaAlignedWindow.cpp
@@ -195,8 +195,6 @@ void MussaAlignedWindow::computeMatchLines()
         // draw for matches stretching across all sequences
         if (full_match)
         {
-          //fl_line_style(FL_SOLID, 1, NULL);
-          
           // now can draw the line for each bp in this window that matches
           // grrr, need to ask if anyone cares if I switch the seq 
           // top-bot order...
@@ -217,19 +215,6 @@ void MussaAlignedWindow::computeMatchLines()
               rc_2 = window_length;        
             }
             
-            // set offset based on current alignment for which bp to show
-            //offset1 = seq_align_offsets[i2];
-            //offset2 = seq_align_offsets[i2+1];
-            
-            if ( ( rc_list[i2] || rc_list[i2+1] ) &&
-                !(rc_list[i2] && rc_list[i2+1] ) ) {
-              ;
-              //fl_color(FL_BLUE);
-            } else {
-              ;
-              //fl_color(FL_RED);
-            }
-            
             // maybe shouldn't recalc these, but store values from first loop
             x_start = (abs((int) (a_path[i2]-rc_1+win_i)));
             x_end =   (abs((int) (a_path[i2+1]-rc_2+win_i)));