View sequence alignment at non default thresholds

[mussa.git] / qui / MussaWindow.cpp

diff --git a/qui/MussaWindow.cpp b/qui/MussaWindow.cpp
index 5c160914ae700a64989f94c732353419768431a0..9e0678c57137ff53b7f859ee7a799bda6a32e676 100644 (file)
--- a/qui/MussaWindow.cpp
+++ b/qui/MussaWindow.cpp
@@ -373,7 +373,6 @@ void MussaWindow::updateAnalysis()
   browser.setSequences(seqs, analysis->colorMapper());
   updateLinks();
   browser.zoomOut();
-  cout << "browser zoom " <<  browser.zoom() << endl;
   zoom.setValue(browser.zoom());
 }
 
@@ -419,7 +418,8 @@ void MussaWindow::updateLinks()
         reversed = false;
       } else {
         reversed = true;
-        x = -x; // make positive
+        // make positive 
+        x = -x;
       }
       normalized_path.push_back(x);
       rc_flags.push_back(reversed);