rewrite of findall.py and MakeRdsFromBam to fix bugs resulting from poor initial...

[erange.git] / combinerds.py

diff --git a/combinerds.py b/combinerds.py
index 2878423a9716a0e4f31d0a1738a0770339c8ed6c..2695e6b512c677735fc61be2931108e947d0ab43 100755 (executable)
--- a/combinerds.py
+++ b/combinerds.py
@@ -35,9 +35,7 @@ def main(argv=None):
     combinerds(datafile, infileList, options.tableList, options.withFlag, options.doIndex, options.cachePages, options.doInit, options.initRNA)
 
 
-def makeParser():
-    usage = __doc__
-
+def makeParser(usage):
     parser = optparse.OptionParser(usage=usage)
     parser.add_option("--table", action="append", dest="tablelist")
     parser.add_option("--init", action="store_true", dest="doInit")