each side of the splice.
You can combine BOWTIE and BLAT by mapping reads with BOWTIE
first, and then using BLAT to map the unmapped reads. In
that case, you may want to only load the spliced reads
each side of the splice.
You can combine BOWTIE and BLAT by mapping reads with BOWTIE
first, and then using BLAT to map the unmapped reads. In
that case, you may want to only load the spliced reads