convert standard analysis pipelines to use bam format natively

[erange.git] / docs / RNA-seq.analysisSteps.txt

diff --git a/docs/RNA-seq.analysisSteps.txt b/docs/RNA-seq.analysisSteps.txt
index b0a1c0f09e270ad2cc47c9af05c84564b5325aaf..96ea795586a252968d1d214f53dfa4a9cdec46fc 100644 (file)
--- a/docs/RNA-seq.analysisSteps.txt
+++ b/docs/RNA-seq.analysisSteps.txt
@@ -1,5 +1,5 @@
 # analysis steps for an ERANGE analysis of RNA-seq data
-# This is an example of the command-line settings used to run each of the scripts in runStandardAnalysis.sh
+# This is an example of the command-line settings used to run each of the scripts in runStandardAnalysis.py
 
 # preliminary: set PYTHONPATH to point to the parent directory of the Cistematic, e.g.
 #              export PYTHONPATH=/my/path/to/cistematic