# Alternative 2: use a precomputed list of "new" regions (outside of gene models)
#python $ERANGEPATH/regionCounts.py $3 $2.nomatch.bed $2.newregions.good $2.stillnomatch.bed
#python $ERANGEPATH/regionCounts.py $3 $2.rds $2.newregions.good
# map all candidate regions that are within a given radius of a gene in bp
# Alternative 2: use a precomputed list of "new" regions (outside of gene models)
#python $ERANGEPATH/regionCounts.py $3 $2.nomatch.bed $2.newregions.good $2.stillnomatch.bed
#python $ERANGEPATH/regionCounts.py $3 $2.rds $2.newregions.good
# map all candidate regions that are within a given radius of a gene in bp