development checkpoint

[erange.git] / normalizeFinalExonic.py

diff --git a/normalizeFinalExonic.py b/normalizeFinalExonic.py
index d5a6b4b954d4a9df6cb7b749c97c513e9394dafb..6c1ae3323555722deea8bf91c5254ceb310560cb 100755 (executable)
--- a/normalizeFinalExonic.py
+++ b/normalizeFinalExonic.py
@@ -24,8 +24,8 @@ def main(argv=None):
         print usage
         sys.exit(1)
 
-    rdsfilename = argv[1]
-    expandedRPKMfile = args[3]
+    rdsfilename = args[0]
+    expandedRPKMfile = args[1]
     multicountfile = args[2]
     outfilename = args[3]