Release version for Erange 4.0a
[erange.git] / test / testErange.py
index d9392ff2fe435a1f87821bd5928e00943f6f6787..d993fad8ba7e7f1dd208d6760d465842538ddba7 100644 (file)
@@ -11,9 +11,15 @@ Created on Sep 8, 2010
 import sys
 import unittest
 import testAnalyzeGO
+import testBedToRegion
+import testBinsToCdf
+import testCdfDist
 import testChksnp
+import testColsum
 import testCommoncode
+import testFeatureIntersects
 import testGeneMrnaCounts
+import testGeneMrnaCountsWeighted
 #import testGetFasta
 import testGetNovelSNPs
 import testGetSNPGeneInfo
@@ -22,15 +28,17 @@ import testMakeBamFromRds
 import testmakebedfromrds
 #import testMakeGraphs
 import testMakeRdsFromBam
+import testMakeSiteTrack
 import testMakeSNPTrack
 import testMarkLinkers
+import testPeak
 import testPeaksToRegion
 import testProcessVelvet
 import testReadDataset
 import testRnaAToIFilter
 import testRnaEditing
 import testRNAPATH
-import testTranscripts
+#import testTranscripts
 
 
 def main(argv=None):
@@ -39,9 +47,15 @@ def main(argv=None):
 
     suite = unittest.TestSuite()
     suite.addTest(testAnalyzeGO.suite())
+    suite.addTest(testBedToRegion.suite())
+    suite.addTest(testBinsToCdf.suite())
+    suite.addTest(testCdfDist.suite())
     suite.addTest(testChksnp.suite())
+    suite.addTest(testColsum.suite())
     suite.addTest(testCommoncode.suite())
+    suite.addTest(testFeatureIntersects.suite())
     suite.addTest(testGeneMrnaCounts.suite())
+    suite.addTest(testGeneMrnaCountsWeighted.suite())
     #suite.addTest(testGetFasta.suite())
     suite.addTest(testGetNovelSNPs.suite())
     suite.addTest(testGetSNPGeneInfo.suite())
@@ -50,8 +64,10 @@ def main(argv=None):
     suite.addTest(testmakebedfromrds.suite())
     #suite.addTest(testMakeGraphs.suite())
     suite.addTest(testMakeRdsFromBam.suite())
+    suite.addTest(testMakeSiteTrack.suite())
     suite.addTest(testMakeSNPTrack.suite())
     suite.addTest(testMarkLinkers.suite())
+    suite.addTest(testPeak.suite())
     suite.addTest(testPeaksToRegion.suite())
     suite.addTest(testProcessVelvet.suite())
     suite.addTest(testReadDataset.suite())