from commoncode import getMergedRegions, getLocusByChromDict
from cistematic.genomes import Genome
-print "%s: version 1.3" % sys.argv[0]
+print "utrChanges: version 1.4"
def main(argv=None):
hg = Genome(genome)
- origLocusByChromDict = getLocusByChromDict(hg, keepSense = True)
- newLocusByChromDict = getLocusByChromDict(hg, additionalRegionsDict = acceptDict, keepSense = True)
+ origLocusByChromDict = getLocusByChromDict(hg, keepSense=True)
+ newLocusByChromDict = getLocusByChromDict(hg, additionalRegionsDict=acceptDict, keepSense=True)
new3utr = 0
new5utr = 0