experiments/serializers.py

   1 from rest_framework import serializers
   2
   3 from .models import (
   4     ClusterStation,
   5     Lane,
   6     FlowCell,
   7     Sequencer,
   8 )
   9
  10
  11 class ClusterStationSerializer(serializers.HyperlinkedModelSerializer):
  12     class Meta:
  13         model = ClusterStation
  14
  15
  16 class LaneSerializer(serializers.HyperlinkedModelSerializer):
  17     flowcell = serializers.HyperlinkedRelatedField(
  18         lookup_field='flowcell_id',
  19         view_name='flowcell-detail')
  20
  21     library = serializers.HyperlinkedRelatedField(
  22         view_name='library-detail')
  23
  24     class Meta:
  25         model = Lane
  26         fields = (
  27             'url',
  28             'lane_number',
  29             'library',
  30             'pM',
  31             'cluster_estimate',
  32             'status',
  33             'comment')
  34
  35
  36 class FlowCellSerializer(serializers.HyperlinkedModelSerializer):
  37     url = serializers.HyperlinkedIdentityField(
  38         lookup_field='flowcell_id',
  39         view_name='flowcell-detail')
  40
  41     class Meta:
  42         model = FlowCell
  43         depth = 2
  44         fields = (
  45             'url',
  46             'flowcell_id',
  47             'run_date',
  48             'paired_end',
  49 #            'flowcell_type',
  50             'read_length',
  51             'control_lane',
  52             'cluster_station',
  53             'sequencer',
  54             'notes',
  55             'lane_set',
  56         )
  57
  58 class SequencerSerializer(serializers.HyperlinkedModelSerializer):
  59     class Meta:
  60         model = Sequencer
  61         fields = ('url', 'name', 'instrument_name', 'serial_number', 'model')