extra/ucsc_encode_submission/find-lib-by-cell.sparql

   1 # Produce list of submissions associated with a cell/replicate
   2
   3 PREFIX rdfs:<http://www.w3.org/2000/01/rdf-schema#>
   4 PREFIX ucscSubmission:<http://jumpgate.caltech.edu/wiki/UcscSubmissionOntology#>
   5 PREFIX libraryOntology:<http://jumpgate.caltech.edu/wiki/LibraryOntology#>
   6
   7 SELECT distinct ?liburn ?cell ?replicate ?subid
   8 WHERE {
   9     ?subid ucscSubmission:library_urn ?liburn ;
  10            ucscSubmission:name ?name .
  11     ?liburn libraryOntology:cell_line ?cell ;
  12             libraryOntology:replicate ?replicate .
  13 }
  14 ORDER BY ?cell ?replicate ?liburn