htsworkflow/automation/test/test_solexa_utils.py

   1
   2 import unittest
   3
   4 from htsworkflow.automation import solexa
   5
   6 class testSolexaRunfolderUtils(unittest.TestCase):
   7     def test_is_runfolder(self):
   8         self.failUnlessEqual(solexa.is_runfolder(""), False)
   9         self.failUnlessEqual(solexa.is_runfolder("1345_23"), False)
  10         self.failUnlessEqual(solexa.is_runfolder("123456_asdf-$23'"), False)
  11         self.failUnlessEqual(solexa.is_runfolder("123456_USI-EAS44"), True)
  12         self.failUnlessEqual(solexa.is_runfolder("123456_USI-EAS44 "), False)
  13
  14
  15     def test_get_top_dir(self):
  16         test_data = [ # root, path, response
  17                       ('/a/b/c', '/a/b/c/d/e/f', 'd'),
  18                       ('/a/b/c/', '/a/b/c/d/e/f', 'd'),
  19                       ('/a/b/c', '/g/e/f', None),
  20                       ('/a/b/c', '/a/b/c', ''),
  21                     ]
  22
  23         for root, path, response in test_data:
  24             self.failUnlessEqual(solexa.get_top_dir(root, path), response)
  25
  26 def suite():
  27     return unittest.makeSuite(testSolexaRunfolderUtils, 'test')
  28
  29 if __name__ == "__main__":
  30     unittest.main(defaultTest="suite")
  31