1 from htsworkflow.frontend.experiments.models import FlowCell, DataRun, ClusterStation, Sequencer, Lane
2 from django.contrib import admin
3 from django.utils.translation import ugettext_lazy as _
5 class LaneInline(admin.StackedInline):
10 class DataRunOptions(admin.ModelAdmin):
15 '=fcid__lane_1_library__library_id',
16 '=fcid__lane_2_library__library_id',
17 '=fcid__lane_3_library__library_id',
18 '=fcid__lane_4_library__library_id',
19 '=fcid__lane_5_library__library_id',
20 '=fcid__lane_6_library__library_id',
21 '=fcid__lane_7_library__library_id',
22 '=fcid__lane_8_library__library_id'
23 'fcid__lane_1_library__library_name',
24 'fcid__lane_2_library__library_name',
25 'fcid__lane_3_library__library_name',
26 'fcid__lane_4_library__library_name',
27 'fcid__lane_5_library__library_name',
28 'fcid__lane_6_library__library_name',
29 'fcid__lane_7_library__library_name',
30 'fcid__lane_8_library__library_name' ]
38 list_filter = ('run_status', 'run_start_time')
40 class FlowCellOptions(admin.ModelAdmin):
41 date_hierarchy = "run_date"
43 search_fields = ('flowcell_id',
45 'cluster_station__name',
46 '=lane_1_library__library_id',
47 '=lane_2_library__library_id',
48 '=lane_3_library__library_id',
49 '=lane_4_library__library_id',
50 '=lane_5_library__library_id',
51 '=lane_6_library__library_id',
52 '=lane_7_library__library_id',
53 '=lane_8_library__library_id',
54 'lane_1_library__library_name',
55 'lane_2_library__library_name',
56 'lane_3_library__library_name',
57 'lane_4_library__library_name',
58 'lane_5_library__library_name',
59 'lane_6_library__library_name',
60 'lane_7_library__library_name',
61 'lane_8_library__library_name')
62 list_display = ('flowcell_id','run_date','Lanes')
63 list_filter = ('sequencer','cluster_station')
66 'fields': ('run_date', ('flowcell_id','cluster_station','sequencer'), ('read_length', 'paired_end'),)
69 'fields' : (('lane_1_library', 'lane_1_pM', 'lane_1_cluster_estimate'), ('lane_2_library', 'lane_2_pM', 'lane_2_cluster_estimate'), ('lane_3_library', 'lane_3_pM', 'lane_3_cluster_estimate'), ('lane_4_library', 'lane_4_pM', 'lane_4_cluster_estimate'), ('lane_5_library', 'lane_5_pM', 'lane_5_cluster_estimate'), ('lane_6_library', 'lane_6_pM', 'lane_6_cluster_estimate'), ('lane_7_library', 'lane_7_pM', 'lane_7_cluster_estimate'), ('lane_8_library', 'lane_8_pM', 'lane_8_cluster_estimate'),)
71 ('Notes:', { 'fields': ('notes',),}),
77 class ClusterStationOptions(admin.ModelAdmin):
78 list_display = ('name', )
79 fieldsets = ( ( None, { 'fields': ( 'name', ) } ), )
81 class SequencerOptions(admin.ModelAdmin):
82 list_display = ('name', )
83 fieldsets = ( ( None, { 'fields': ( 'name', ) } ), )
85 class LaneOptions(admin.ModelAdmin):
86 list_display = ('flowcell', 'lane_number', 'library', 'comment')
89 'fields': ('lane_number', 'flowcell', 'library', 'pM', 'cluster_estimate')
92 'classes': ('collapse', ),
93 'fields': ('comment', )
98 admin.site.register(DataRun, DataRunOptions)
99 admin.site.register(FlowCell, FlowCellOptions)
100 admin.site.register(ClusterStation, ClusterStationOptions)
101 admin.site.register(Sequencer, SequencerOptions)
102 admin.site.register(Lane, LaneOptions)