htsworkflow/frontend/experiments/fixtures/test_flowcells.json

   1 [
   2     {"pk": 5, "model": "auth.user",
   3    "fields": {
   4        "username": "test",
   5        "first_name": "",
   6        "last_name": "",
   7        "is_active": true,
   8        "is_superuser": false,
   9        "is_staff": false,
  10        "last_login": "2009-01-01T00:00:01-0800",
  11        "groups": [],
  12        "user_permissions": [],
  13        "password": "sha1$foo$5e4eefec1144a04becfb7da79244f07c487fc345",
  14        "email": "",
  15        "date_joined": "2009-01-01T00:01:01-0800"
  16        }
  17    },
  18    {"pk": 5, "model": "samples.htsuser",
  19     "fields" : {}
  20    },
  21    {"pk": 6, "model": "auth.user",
  22    "fields": {
  23        "username": "admintest",
  24        "first_name": "",
  25        "last_name": "",
  26        "is_active": true,
  27        "is_superuser": false,
  28        "is_staff": true,
  29        "last_login": "2009-01-01T00:00:01-0800",
  30        "groups": [],
  31        "user_permissions": [],
  32        "password": "sha1$foo$5e4eefec1144a04becfb7da79244f07c487fc345",
  33        "email": "",
  34        "date_joined": "2009-01-01T00:01:01-0800"
  35        }
  36    },
  37    {"pk": 6, "model": "samples.htsuser",
  38     "fields" : {}
  39    },
  40    {"pk": 7, "model": "auth.user",
  41    "fields": {
  42        "username": "supertest",
  43        "first_name": "",
  44        "last_name": "",
  45        "is_active": true,
  46        "is_superuser": true,
  47        "is_staff": true,
  48        "last_login": "2009-01-01T00:00:01-0800",
  49        "groups": [],
  50        "user_permissions": [],
  51        "password": "sha1$foo$5e4eefec1144a04becfb7da79244f07c487fc345",
  52        "email": "",
  53        "date_joined": "2009-01-01T00:01:01-0800"
  54        }
  55    },
  56    {"pk": 7, "model": "samples.htsuser",
  57     "fields" : {}
  58    },
  59    {"pk": 1, "model": "samples.affiliation",
  60      "fields": {
  61          "users": [5],
  62          "contact": "group 1",
  63          "name": "affiliation 1",
  64          "email": "pk1@example.com"
  65          }
  66      },
  67     {"pk": 2, "model": "samples.affiliation",
  68      "fields": {
  69          "users": [6],
  70          "contact": "group 2",
  71          "name": "affiliation 2",
  72          "email": "pk2@example.com"
  73          }
  74      },
  75     {"pk": 3, "model": "samples.affiliation",
  76      "fields": {
  77          "users": [],
  78          "contact": "group 3",
  79          "name": "affiliation 3",
  80          "email": "pk3@example.com"
  81          }
  82      },
  83     {"pk": 4, "model": "samples.affiliation",
  84      "fields": {
  85          "users": [],
  86          "contact": "group 4",
  87          "name": "affiliation 4",
  88          "email": "pk1@example.com"
  89          }
  90      },
  91     {"pk": 5, "model": "samples.affiliation",
  92      "fields": {
  93          "users": [],
  94          "contact": "group 5",
  95          "name": "affiliation 5",
  96          "email": "pk5@example.com"
  97          }
  98      },
  99  {"pk": 1, "model": "experiments.clusterstation",
 100   "fields": {"name": "old", "isdefault": false}},
 101  {"pk": 2, "model": "experiments.clusterstation",
 102   "fields": {"name": "loaner", "isdefault": true}},
 103  {"pk": 3, "model": "experiments.clusterstation",
 104   "fields": {"name": "new", "isdefault": false}},
 105  {"pk": 1, "model": "experiments.sequencer",
 106   "fields": { "name": "Rotifer (HWI-EAS229)",
 107               "model": "Illumina Genome Analyzer I",
 108               "active": false,
 109               "isdefault": false }},
 110  {"pk": 2, "model": "experiments.sequencer",
 111   "fields": {"name": "Tardigrade",
 112              "instrument_name": "ILLUMINA-EC5D15",
 113              "model": "Illumina Genome Analyzer IIx",
 114              "active": true,
 115              "isdefault": true}
 116  },
 117  {"pk": 3, "model": "experiments.sequencer",
 118   "fields": {"name": "Sequenced somewhere else.",
 119              "model": "Unknown",
 120              "active": true,
 121              "isdefault": false}},
 122  {"pk": 153, "model": "experiments.flowcell",
 123   "fields": {
 124       "paired_end": true,
 125       "run_date": "2007-09-27T22:12:13-0800",
 126       "read_length": 36,
 127       "notes": "",
 128       "advanced_run": false,
 129       "control_lane": 2,
 130       "cluster_station": 3,
 131       "sequencer": 2,
 132       "flowcell_id": "FC12150"
 133       }
 134   },
 135   {"pk": 1193, "model": "experiments.lane",
 136    "fields": {
 137        "comment": "No change in cluster numbers, despite slight increase in pM",
 138        "library": "10981",
 139        "cluster_estimate": 129000,
 140        "flowcell": 153,
 141        "lane_number": 1,
 142        "pM": "8"
 143        }
 144    },
 145    {"pk": 1192, "model": "experiments.lane",
 146     "fields": {
 147         "comment": "Other library",
 148         "library": "11070",
 149         "cluster_estimate": 132000,
 150         "flowcell": 153,
 151         "lane_number": 1,
 152         "pM": "7"
 153         }
 154     },
 155
 156   {"pk": "10981", "model": "samples.library",
 157         "fields": {
 158             "ten_nM_dilution": false,
 159             "gel_cut_size": 400,
 160             "library_name": "Paired End Multiplexed Sp-BAC",
 161             "creation_date": "2009-07-21",
 162             "cell_line": 1,
 163             "library_species": 10,
 164             "library_type": null,
 165             "made_by": "Igor",
 166             "affiliations": [
 167                 1,2
 168             ],
 169             "replicate": 1,
 170             "condition": 1,
 171             "hidden": false,
 172             "stopping_point": "Done",
 173             "tags": [],
 174             "made_for": "Andy Cameron",
 175             "amplified_from_sample": null,
 176             "notes": "Combined 10957-10968",
 177             "undiluted_concentration": "5.1",
 178             "successful_pM": null,
 179             "experiment_type": 10,
 180             "antibody": null
 181         }
 182     },
 183   {"pk": 1194, "model": "experiments.lane",
 184    "fields": {
 185        "comment": "",
 186        "library": "11016",
 187        "cluster_estimate": 152000,
 188        "flowcell": 153,
 189        "lane_number": 2,
 190        "pM": "7"
 191        }
 192    },
 193     {
 194         "pk": "11006",
 195         "model": "samples.library",
 196         "fields": {
 197             "ten_nM_dilution": false,
 198             "gel_cut_size": 325,
 199             "library_name": "Paired End Pfl #3 MP 7/24/9",
 200             "creation_date": "2009-08-05",
 201             "cell_line": 1,
 202             "library_species": 8,
 203             "library_type": 2,
 204             "made_by": "Lorian",
 205             "affiliations": [
 206                 41
 207             ],
 208             "replicate": 1,
 209             "condition": 1,
 210             "hidden": true,
 211             "stopping_point": "1A",
 212             "tags": [],
 213             "made_for": "",
 214             "amplified_from_sample": null,
 215             "notes": "7/31/2009 16:08:22\tColor: Blue",
 216             "undiluted_concentration": null,
 217             "successful_pM": null,
 218             "experiment_type": 8,
 219             "antibody": null
 220         }
 221     },
 222     {
 223         "pk": "11016",
 224         "model": "samples.library",
 225         "fields": {
 226             "ten_nM_dilution": false,
 227             "gel_cut_size": 325,
 228             "library_name": "Paired End Pfl #3 MP 7/24/9 a",
 229             "creation_date": "2009-08-06",
 230             "cell_line": 1,
 231             "library_species": 2,
 232             "library_type": 2,
 233             "made_by": "Lorian",
 234             "affiliations": [
 235                 2
 236             ],
 237             "replicate": 1,
 238             "condition": 1,
 239             "hidden": false,
 240             "stopping_point": "1Aa",
 241             "tags": [],
 242             "made_for": "",
 243             "amplified_from_sample": 11006,
 244             "notes": "7/31/2009 16:08:22\tColor: Blue",
 245             "undiluted_concentration": "35.5",
 246             "successful_pM": null,
 247             "experiment_type": 8,
 248             "antibody": null
 249         }
 250     },
 251   {"pk": 1195, "model": "experiments.lane",
 252    "fields": {
 253        "comment": "",
 254        "library": "SL039",
 255        "cluster_estimate": 162000,
 256        "flowcell": 153,
 257        "lane_number": 3,
 258        "pM": "7"
 259        }
 260    },
 261     {
 262         "pk": "SL039",
 263         "model": "samples.library",
 264         "fields": {
 265             "ten_nM_dilution": false,
 266             "gel_cut_size": 300,
 267             "library_name": "Paired ends 99 GM12892",
 268             "creation_date": "2009-08-25",
 269             "cell_line": 1,
 270             "library_species": 8,
 271             "library_type": 2,
 272             "made_by": "Brian Williams",
 273             "affiliations": [
 274                 3,4
 275             ],
 276             "replicate": 1,
 277             "condition": 1,
 278             "hidden": false,
 279             "stopping_point": "1Aa",
 280             "tags": [],
 281             "made_for": "Brian Williams",
 282             "amplified_from_sample": 11006,
 283             "notes": "fragment size = 300 bp, Amicon filtered\r\nnanodrop: 56.3",
 284             "undiluted_concentration": "28.7",
 285             "successful_pM": null,
 286             "experiment_type": 4,
 287             "antibody": null
 288         }
 289     },
 290   {"pk": 1196, "model": "experiments.lane",
 291    "fields": {
 292        "comment": "This lane's library had the second lowest concentration of all the libraries built at the same time (2.05ng/ul)",
 293        "library": "11060",
 294        "cluster_estimate": 24000,
 295        "flowcell": 153,
 296        "lane_number": 4,
 297        "pM": "7"
 298        }
 299    },
 300     {
 301         "pk": "11060",
 302         "model": "samples.library",
 303         "fields": {
 304             "ten_nM_dilution": false,
 305             "gel_cut_size": 300,
 306             "library_name": "Paired ends 100 VC_CN_4_M_MBB1185_s1",
 307             "creation_date": "2009-09-01",
 308             "cell_line": 1,
 309             "library_species": 8,
 310             "library_type": 2,
 311             "made_by": "Brian Williams",
 312             "affiliations": [
 313                 5
 314             ],
 315             "replicate": 1,
 316             "condition": 1,
 317             "hidden": false,
 318             "stopping_point": "1Aa",
 319             "tags": [],
 320             "made_for": "Brian Williams",
 321             "amplified_from_sample": 11006,
 322             "notes": "300 bp gel fragment, Amicon filtered\r\nnanodrop: 24.2",
 323             "undiluted_concentration": "2.05",
 324             "successful_pM": null,
 325             "experiment_type": 4,
 326             "antibody": null
 327         }
 328     },
 329   {"pk": 1197, "model": "experiments.lane",
 330    "fields": {
 331        "comment": "stuff",
 332        "library": "11061",
 333        "cluster_estimate": 140000,
 334        "flowcell": 153,
 335        "lane_number": 5,
 336        "pM": "7",
 337        "status": 2
 338        }
 339    },
 340     {
 341         "pk": "11061",
 342         "model": "samples.library",
 343         "fields": {
 344             "ten_nM_dilution": false,
 345             "gel_cut_size": 300,
 346             "library_name": "Paired ends 101 VC_CN_4_M_MBB1185_s2",
 347             "creation_date": "2009-09-01",
 348             "cell_line": 1,
 349             "library_species": 8,
 350             "library_type": 2,
 351             "made_by": "Brian Williams",
 352             "affiliations": [
 353                 2,4
 354             ],
 355             "replicate": 1,
 356             "condition": 1,
 357             "hidden": false,
 358             "stopping_point": "1Aa",
 359             "tags": [],
 360             "made_for": "Brian Williams",
 361             "amplified_from_sample": null,
 362             "notes": "300 bp gel fragment, Amicon filtered\r\nnanodrop: 33.1",
 363             "undiluted_concentration": "12.9",
 364             "successful_pM": null,
 365             "experiment_type": 4,
 366             "antibody": null
 367         }
 368     },
 369   {"pk": 1198, "model": "experiments.lane",
 370    "fields": {
 371        "comment": "This lane's library had the lowest concentration of all the libraries built at the same time (1.2ng/ul)",
 372        "library": "11062",
 373        "cluster_estimate": 2000,
 374        "flowcell": 153,
 375        "lane_number": 6,
 376        "pM": "7",
 377        "status": 0
 378        }
 379    },
 380     {
 381         "pk": "11062",
 382         "model": "samples.library",
 383         "fields": {
 384             "ten_nM_dilution": false,
 385             "gel_cut_size": 300,
 386             "library_name": "Paired ends 102 VC_AU_8_M_MBB4721_s1",
 387             "creation_date": "2009-09-01",
 388             "cell_line": 1,
 389             "library_species": 8,
 390             "library_type": 2,
 391             "made_by": "Brian Williams",
 392             "affiliations": [
 393                 4,5
 394             ],
 395             "replicate": 1,
 396             "condition": 1,
 397             "hidden": false,
 398             "stopping_point": "1Aa",
 399             "tags": [],
 400             "made_for": "Brian Williams",
 401             "amplified_from_sample": null,
 402             "notes": "300 bp gel fragment, Amicon filtered\r\nnanodrop: 13.9",
 403             "undiluted_concentration": "1.2",
 404             "successful_pM": null,
 405             "experiment_type": 4,
 406             "antibody": null
 407         }
 408     },
 409   {"pk": 1199, "model": "experiments.lane",
 410    "fields": {
 411        "comment": "",
 412        "library": "11063",
 413        "cluster_estimate": 120000,
 414        "flowcell": 153,
 415        "lane_number": 7,
 416        "pM": "7"
 417        }
 418    },
 419     {
 420         "pk": "11063",
 421         "model": "samples.library",
 422         "fields": {
 423             "ten_nM_dilution": false,
 424             "gel_cut_size": 300,
 425             "library_name": "Paired ends 103 VC_AU_8_M_MBB4721_s2",
 426             "creation_date": "2009-09-01",
 427             "cell_line": 1,
 428             "library_species": 8,
 429             "library_type": 2,
 430             "made_by": "Brian Williams",
 431             "affiliations": [
 432                 1,3
 433             ],
 434             "replicate": 1,
 435             "condition": 1,
 436             "hidden": false,
 437             "stopping_point": "1Aa",
 438             "tags": [],
 439             "made_for": "Brian Williams",
 440             "amplified_from_sample": null,
 441             "notes": "300 bp gel fragment, Amicon filtered\r\nnanodrop: 46.9",
 442             "undiluted_concentration": "24.5",
 443             "successful_pM": null,
 444             "experiment_type": 4,
 445             "antibody": null
 446         }
 447     },
 448   {"pk": 1200, "model": "experiments.lane",
 449    "fields": {
 450        "comment": "This lane's library had the third lowest concentration of all the libraries built at the same time (5.21ng/ul), but gave perfectly normal cluster numbers",
 451        "library": "11064",
 452        "cluster_estimate": 157000,
 453        "flowcell": 153,
 454        "lane_number": 8,
 455        "pM": "7"
 456        }
 457    },
 458     {
 459         "pk": "11064",
 460         "model": "samples.library",
 461         "fields": {
 462             "ten_nM_dilution": false,
 463             "gel_cut_size": 300,
 464             "library_name": "Paired ends 104 VC_CN_7_M_MBB4898_s1",
 465             "creation_date": "2009-09-01",
 466             "cell_line": 1,
 467             "library_species": 8,
 468             "library_type": 2,
 469             "made_by": "Brian Williams",
 470             "affiliations": [
 471                 3,5
 472             ],
 473             "replicate": 1,
 474             "condition": 1,
 475             "hidden": false,
 476             "stopping_point": "1Aa",
 477             "tags": [],
 478             "made_for": "Brian Williams",
 479             "amplified_from_sample": null,
 480             "notes": "300 bp gel fragment, Amicon filtered\r\nnanodrop: 20.4",
 481             "undiluted_concentration": "5.21",
 482             "successful_pM": null,
 483             "experiment_type": 4,
 484             "antibody": null
 485         }
 486     },
 487    {"pk": 152, "model": "experiments.flowcell",
 488    "fields": {
 489        "paired_end": false,
 490        "run_date": "2009-09-10T18:30:15-0800",
 491        "read_length": 38,
 492        "notes": "328461 4897273 RGT-0248815\r\n328479 4897265 RGT-0249274\r\n330421 4822845 SR-0005496",
 493        "advanced_run": false,
 494        "control_lane": 4,
 495        "cluster_station": 3,
 496        "sequencer": 1,
 497        "flowcell_id": "42JTNAAXX"
 498        }
 499    },
 500   {"pk": 1185, "model": "experiments.lane",
 501    "fields": {
 502        "comment": "",
 503        "library": "11035",
 504        "cluster_estimate": 174000,
 505        "flowcell": 152,
 506        "lane_number": 1,
 507        "pM": "7"
 508        }
 509    },
 510     {
 511         "pk": "11035",
 512         "model": "samples.library",
 513         "fields": {
 514             "ten_nM_dilution": false,
 515             "gel_cut_size": 300,
 516             "library_name": "Paired ends 95 Gilberto_d3_control_LTA",
 517             "creation_date": "2009-08-25",
 518             "cell_line": 1,
 519             "library_species": 9,
 520             "library_type": 2,
 521             "made_by": "Brian Williams",
 522             "affiliations": [
 523                 3
 524             ],
 525             "replicate": 1,
 526             "condition": 1,
 527             "hidden": false,
 528             "stopping_point": "1Aa",
 529             "tags": [],
 530             "made_for": "Brian Williams",
 531             "amplified_from_sample": null,
 532             "notes": "fragment size = 300 bp, Amicon filtered\r\nnanodrop: 67.1",
 533             "undiluted_concentration": "28.5",
 534             "successful_pM": null,
 535             "experiment_type": 4,
 536             "antibody": null
 537         }
 538     },
 539   {"pk": 1186, "model": "experiments.lane",
 540    "fields": {
 541        "comment": "",
 542        "library": "11037",
 543        "cluster_estimate": 173000,
 544        "flowcell": 152,
 545        "lane_number": 2,
 546        "pM": "7"
 547        }
 548    },
 549     {
 550         "pk": "11037",
 551         "model": "samples.library",
 552         "fields": {
 553             "ten_nM_dilution": false,
 554             "gel_cut_size": 300,
 555             "library_name": "Paired ends 97 Kuntz_PDHT",
 556             "creation_date": "2009-08-25",
 557             "cell_line": 1,
 558             "library_species": 3,
 559             "library_type": 2,
 560             "made_by": "Brian Williams",
 561             "affiliations": [
 562                 4
 563             ],
 564             "replicate": 1,
 565             "condition": 1,
 566             "hidden": false,
 567             "stopping_point": "1Aa",
 568             "tags": [],
 569             "made_for": "Brian Williams",
 570             "amplified_from_sample": null,
 571             "notes": "fragment size = 300 bp, Amicon filtered\r\nnanodrop: 52.7",
 572             "undiluted_concentration": "25.5",
 573             "successful_pM": null,
 574             "experiment_type": 4,
 575             "antibody": null
 576         }
 577     },
 578   {"pk": 1187, "model": "experiments.lane",
 579    "fields": {
 580        "comment": "",
 581        "library": "11045",
 582        "cluster_estimate": 198000,
 583        "flowcell": 152,
 584        "lane_number": 3,
 585        "pM": "7"
 586        }
 587    },
 588     {
 589         "pk": "11045",
 590         "model": "samples.library",
 591         "fields": {
 592             "ten_nM_dilution": false,
 593             "gel_cut_size": 250,
 594             "library_name": "FLDN1 8/3/9 anti-AcH3 chip B6 a",
 595             "creation_date": "2009-08-26",
 596             "cell_line": null,
 597             "library_species": 9,
 598             "library_type": 1,
 599             "made_by": "Lorian",
 600             "affiliations": [
 601                 5
 602             ],
 603             "replicate": 1,
 604             "condition": null,
 605             "hidden": false,
 606             "stopping_point": "2A",
 607             "tags": [],
 608             "made_for": "",
 609             "amplified_from_sample": null,
 610             "notes": "8/21/2009 11:57:54\tColor: Yellow",
 611             "undiluted_concentration": "20.5",
 612             "successful_pM": null,
 613             "experiment_type": 2,
 614             "antibody": null
 615         }
 616     },
 617   {"pk": 1188, "model": "experiments.lane",
 618    "fields": {
 619        "comment": "",
 620        "library": "11046",
 621        "cluster_estimate": 212000,
 622        "flowcell": 152,
 623        "lane_number": 4,
 624        "pM": "7"}
 625    },
 626     {
 627         "pk": "11046",
 628         "model": "samples.library",
 629         "fields": {
 630             "ten_nM_dilution": false,
 631             "gel_cut_size": 250,
 632             "library_name": "FLDN1 7/8/9 anti-DiMeH3K4 chip B6 a",
 633             "creation_date": "2009-08-26",
 634             "cell_line": null,
 635             "library_species": 9,
 636             "library_type": 1,
 637             "made_by": "Lorian",
 638             "affiliations": [
 639                 6
 640             ],
 641             "replicate": 1,
 642             "condition": null,
 643             "hidden": false,
 644             "stopping_point": "2A",
 645             "tags": [],
 646             "made_for": "",
 647             "amplified_from_sample": null,
 648             "notes": "8/21/2009 11:57:54\tColor: Blue",
 649             "undiluted_concentration": "23.9",
 650             "successful_pM": null,
 651             "experiment_type": 2,
 652             "antibody": null
 653         }
 654     },
 655   {"pk": 1189, "model": "experiments.lane",
 656    "fields": {
 657        "comment": "",
 658        "library": "11054",
 659        "cluster_estimate": 49000,
 660        "flowcell": 152,
 661        "lane_number": 5,
 662        "pM": "7"
 663        }
 664    },
 665     {
 666         "pk": "11054",
 667         "model": "samples.library",
 668         "fields": {
 669             "ten_nM_dilution": false,
 670             "gel_cut_size": 225,
 671             "library_name": "HNDHT HLH hnd-1 strain HT115 fed anti-hlh-1 2% fix plate a",
 672             "creation_date": "2009-08-31",
 673             "cell_line": null,
 674             "library_species": 3,
 675             "library_type": 1,
 676             "made_by": "Lorian",
 677             "affiliations": [
 678                 1
 679             ],
 680             "replicate": 1,
 681             "condition": null,
 682             "hidden": false,
 683             "stopping_point": "1Aa",
 684             "tags": [],
 685             "made_for": "",
 686             "amplified_from_sample": null,
 687             "notes": "8/26/2009 14:46:56\tColor: Purple",
 688             "undiluted_concentration": "1.47",
 689             "successful_pM": null,
 690             "experiment_type": 2,
 691             "antibody": null
 692         }
 693     },
 694   {"pk": 1190, "model": "experiments.lane",
 695    "fields": {
 696        "comment": "",
 697        "library": "11056",
 698        "cluster_estimate": 48000,
 699        "flowcell": 152,
 700        "lane_number": 6,
 701        "pM": "7"
 702        }
 703    },
 704     {
 705         "pk": "11056",
 706         "model": "samples.library",
 707         "fields": {
 708             "ten_nM_dilution": false,
 709             "gel_cut_size": 225,
 710             "library_name": "HNDM3 HLH hnd-1 strain mex-3 fed anti-hlh-1 2% fix plate a",
 711             "creation_date": "2009-08-31",
 712             "cell_line": null,
 713             "library_species": 3,
 714             "library_type": 1,
 715             "made_by": "Lorian",
 716             "affiliations": [
 717                 2
 718             ],
 719             "replicate": 1,
 720             "condition": null,
 721             "hidden": false,
 722             "stopping_point": "1Aa",
 723             "tags": [],
 724             "made_for": "",
 725             "amplified_from_sample": null,
 726             "notes": "8/26/2009 14:46:56\tColor: Black",
 727             "undiluted_concentration": "1.42",
 728             "successful_pM": null,
 729             "experiment_type": 2,
 730             "antibody": null
 731         }
 732     },
 733   {"pk": 1191, "model": "experiments.lane",
 734    "fields": {
 735        "comment": "",
 736        "library": "11057",
 737        "cluster_estimate": 4000,
 738        "flowcell": 152,
 739        "lane_number": 7,
 740        "pM": "7"
 741        }
 742    },
 743     {
 744         "pk": "11057",
 745         "model": "samples.library",
 746         "fields": {
 747             "ten_nM_dilution": false,
 748             "gel_cut_size": 225,
 749             "library_name": "HNDM3 4H8 hnd-1 strain mex-3 fed 4H8 2% fix plate a",
 750             "creation_date": "2009-08-31",
 751             "cell_line": null,
 752             "library_species": 3,
 753             "library_type": 1,
 754             "made_by": "Lorian",
 755             "affiliations": [
 756                 3
 757             ],
 758             "replicate": 1,
 759             "condition": null,
 760             "hidden": false,
 761             "stopping_point": "1Aa",
 762             "tags": [],
 763             "made_for": "",
 764             "amplified_from_sample": null,
 765             "notes": "8/26/2009 14:46:56\tColor: Orange.",
 766             "undiluted_concentration": "1.3",
 767             "successful_pM": null,
 768             "experiment_type": 2,
 769             "antibody": null
 770         }
 771     },
 772   {"pk": 1192, "model": "experiments.lane",
 773    "fields": {
 774        "comment": "",
 775        "library": "11065",
 776        "cluster_estimate": 5000,
 777        "flowcell": 152,
 778        "lane_number": 8,
 779        "pM": "7"
 780        }
 781    },
 782     {
 783         "pk": "11065",
 784         "model": "samples.library",
 785         "fields": {
 786             "ten_nM_dilution": false,
 787             "gel_cut_size": 300,
 788             "library_name": "Paired ends 105 Kuntz PDM3",
 789             "creation_date": "2009-09-01",
 790             "cell_line": 1,
 791             "library_species": 3,
 792             "library_type": 2,
 793             "made_by": "Brian Williams",
 794             "affiliations": [
 795                 4
 796             ],
 797             "replicate": 1,
 798             "condition": 1,
 799             "hidden": false,
 800             "stopping_point": "1Aa",
 801             "tags": [],
 802             "made_for": "Brian Williams",
 803             "amplified_from_sample": null,
 804             "notes": "300 bp gel fragment, Amicon filtered\r\nnanodrop: 30.5",
 805             "undiluted_concentration": "2.47",
 806             "successful_pM": null,
 807             "experiment_type": 4,
 808             "antibody": null
 809         }
 810     },
 811   {"pk": 151, "model": "experiments.flowcell",
 812    "fields": {
 813        "paired_end": false,
 814        "run_date": "2009-09-08T15:39:28-0800",
 815        "read_length": 38,
 816        "notes": "Rebuild of broken flowcell\r\n\r\n328461 4820241 RGT-0215719\r\n328479 4897265 RGT-0249510\r\n330421 4822845 SR-0005402\r\n",
 817        "advanced_run": false,
 818        "control_lane": 5,
 819        "cluster_station": 3,
 820        "sequencer": 2,
 821        "flowcell_id": "42JU1AAXX"
 822        }
 823    },
 824   {"pk": 1177, "model": "experiments.lane",
 825    "fields": {
 826        "comment": "",
 827        "library": "11034",
 828        "cluster_estimate": 177000,
 829        "flowcell": 151,
 830        "lane_number": 1,
 831        "pM": "7"
 832        }
 833    },
 834   {"pk": 1178, "model": "experiments.lane",
 835    "fields": {
 836        "comment": "",
 837        "library": "11036",
 838        "cluster_estimate": 169000,
 839        "flowcell": 151,
 840        "lane_number": 2,
 841        "pM": "7"
 842        }
 843    },
 844     {
 845         "pk": "11036",
 846         "model": "samples.library",
 847         "fields": {
 848             "ten_nM_dilution": false,
 849             "gel_cut_size": 300,
 850             "library_name": "Paired ends 96 Kuntz_PDE1",
 851             "creation_date": "2009-08-25",
 852             "cell_line": 1,
 853             "library_species": 3,
 854             "library_type": 2,
 855             "made_by": "Brian Williams",
 856             "affiliations": [
 857                 5
 858             ],
 859             "replicate": 1,
 860             "condition": 1,
 861             "hidden": false,
 862             "stopping_point": "1Aa",
 863             "tags": [],
 864             "made_for": "Brian Williams",
 865             "amplified_from_sample": null,
 866             "notes": "fragment size = 300 bp",
 867             "undiluted_concentration": "30.6",
 868             "successful_pM": null,
 869             "experiment_type": 4,
 870             "antibody": null
 871         }
 872     },
 873     {
 874         "pk": "11034",
 875         "model": "samples.library",
 876         "fields": {
 877             "ten_nM_dilution": false,
 878             "gel_cut_size": 300,
 879             "library_name": "Paired ends 94 Gilberto_d3_denerv_LTA",
 880             "creation_date": "2009-08-25",
 881             "cell_line": 1,
 882             "library_species": 9,
 883             "library_type": 2,
 884             "made_by": "Brian Williams",
 885             "affiliations": [
 886                 1
 887             ],
 888             "replicate": 1,
 889             "condition": 1,
 890             "hidden": false,
 891             "stopping_point": "1Aa",
 892             "tags": [],
 893             "made_for": "Brian Williams",
 894             "amplified_from_sample": null,
 895             "notes": "fragment size = 300 bp",
 896             "undiluted_concentration": "27",
 897             "successful_pM": null,
 898             "experiment_type": 4,
 899             "antibody": null
 900         }
 901     },
 902     {
 903         "pk": "12044",
 904         "model": "samples.library",
 905         "fields": {
 906             "ten_nM_dilution": false,
 907             "gel_cut_size": 225,
 908             "library_name": "Pooled Indexed Test",
 909             "creation_date": "2009-08-26",
 910             "cell_line": null,
 911             "library_species": 9,
 912             "library_type": 5,
 913             "multiplex_id": "1,2,3",
 914             "made_by": "Lorian",
 915             "affiliations": [
 916                 2
 917             ],
 918             "replicate": 1,
 919             "condition": null,
 920             "hidden": false,
 921             "stopping_point": "2A",
 922             "tags": [],
 923             "made_for": "",
 924             "amplified_from_sample": null,
 925             "notes": "8/21/2009 11:57:54\tColor: Orange",
 926             "undiluted_concentration": "22.4",
 927             "successful_pM": null,
 928             "experiment_type": 2,
 929             "antibody": null
 930         }
 931     },
 932     {
 933         "pk": "13044",
 934         "model": "samples.library",
 935         "fields": {
 936             "ten_nM_dilution": false,
 937             "gel_cut_size": 225,
 938             "library_name": "Dual Indexed Test",
 939             "creation_date": "2009-08-26",
 940             "cell_line": null,
 941             "library_species": 9,
 942             "library_type": 9,
 943             "multiplex_id": "N701-N501",
 944             "made_by": "Lorian",
 945             "affiliations": [
 946                 2
 947             ],
 948             "replicate": 1,
 949             "condition": null,
 950             "hidden": false,
 951             "stopping_point": "2A",
 952             "tags": [],
 953             "made_for": "",
 954             "amplified_from_sample": null,
 955             "notes": "8/21/2009 11:57:54\tColor: Orange",
 956             "undiluted_concentration": "22.4",
 957             "successful_pM": null,
 958             "experiment_type": 2,
 959             "antibody": null
 960         }
 961     },
 962     {
 963         "pk": "11045",
 964         "model": "samples.library",
 965         "fields": {
 966             "ten_nM_dilution": false,
 967             "gel_cut_size": 225,
 968             "library_name": "Simple Indexed Test",
 969             "creation_date": "2009-08-26",
 970             "cell_line": null,
 971             "library_species": 9,
 972             "library_type": 5,
 973             "multiplex_id": "1",
 974             "made_by": "Lorian",
 975             "affiliations": [
 976                 2
 977             ],
 978             "replicate": 2,
 979             "condition": null,
 980             "hidden": false,
 981             "stopping_point": "2A",
 982             "tags": [],
 983             "made_for": "",
 984             "amplified_from_sample": null,
 985             "notes": "8/21/2009 11:57:54\tColor: Orange",
 986             "undiluted_concentration": "22.4",
 987             "successful_pM": null,
 988             "experiment_type": 2,
 989             "antibody": null
 990         }
 991     },
 992   {"pk": 1179,
 993    "model": "experiments.lane",
 994    "fields": {
 995        "comment": "",
 996        "library": "12044",
 997        "cluster_estimate": 196000,
 998        "flowcell": 151,
 999        "lane_number": 3,
1000        "pM": "7"
1001        }
1002    },
1003   {"pk": 1279,
1004    "model": "experiments.lane",
1005    "fields": {
1006        "comment": "",
1007        "library": "11045",
1008        "cluster_estimate": 196000,
1009        "flowcell": 151,
1010        "lane_number": 3,
1011        "pM": "7"
1012        }
1013    },
1014   {"pk": 1379,
1015    "model": "experiments.lane",
1016    "fields": {
1017        "comment": "",
1018        "library": "13044",
1019        "cluster_estimate": 196000,
1020        "flowcell": 151,
1021        "lane_number": 4,
1022        "pM": "7"
1023        }
1024    },
1025
1026     {
1027         "pk": "11044",
1028         "model": "samples.library",
1029         "fields": {
1030             "ten_nM_dilution": false,
1031             "gel_cut_size": 225,
1032             "library_name": "p300 60h C2 FA KF 12/22/8 a",
1033             "creation_date": "2009-08-26",
1034             "cell_line": null,
1035             "library_species": 9,
1036             "library_type": 1,
1037             "made_by": "Lorian",
1038             "affiliations": [
1039                 3
1040             ],
1041             "replicate": 1,
1042             "condition": null,
1043             "hidden": false,
1044             "stopping_point": "2A",
1045             "tags": [],
1046             "made_for": "",
1047             "amplified_from_sample": null,
1048             "notes": "8/21/2009 11:57:54\tColor: Orange.",
1049             "undiluted_concentration": "22.4",
1050             "successful_pM": null,
1051             "experiment_type": 2,
1052             "antibody": null
1053         }
1054     },
1055   {"pk": 1180, "model": "experiments.lane",
1056    "fields": {
1057        "comment": "",
1058        "library": "11047",
1059        "cluster_estimate": 200000,
1060        "flowcell": 151,
1061        "lane_number": 4,
1062        "pM": "7"
1063        }
1064    },
1065     {
1066         "pk": "11047",
1067         "model": "samples.library",
1068         "fields": {
1069             "ten_nM_dilution": false,
1070             "gel_cut_size": 250,
1071             "library_name": "FLDN1 7/8/9 anti-TriMeH3K27 chip B6 a",
1072             "creation_date": "2009-08-26",
1073             "cell_line": null,
1074             "library_species": 9,
1075             "library_type": 1,
1076             "made_by": "Lorian",
1077             "affiliations": [
1078                 4
1079             ],
1080             "replicate": 1,
1081             "condition": null,
1082             "hidden": false,
1083             "stopping_point": "2A",
1084             "tags": [],
1085             "made_for": "",
1086             "amplified_from_sample": null,
1087             "notes": "8/21/2009 11:57:54\tColor: Green",
1088             "undiluted_concentration": "24.9",
1089             "successful_pM": null,
1090             "experiment_type": 2,
1091             "antibody": null
1092         }
1093     },
1094   {"pk": 1181, "model": "experiments.lane",
1095    "fields": {
1096        "comment": "",
1097        "library": "11055",
1098        "cluster_estimate": 104000,
1099        "flowcell": 151,
1100        "lane_number": 5,
1101        "pM": "7"
1102        }
1103    },
1104     {
1105         "pk": "11055",
1106         "model": "samples.library",
1107         "fields": {
1108             "ten_nM_dilution": false,
1109             "gel_cut_size": 225,
1110             "library_name": "HNDHT 4H8 hnd-1 strain HT115 fed 4H8 2% fix plate a",
1111             "creation_date": "2009-08-31",
1112             "cell_line": null,
1113             "library_species": 3,
1114             "library_type": 1,
1115             "made_by": "Lorian",
1116             "affiliations": [
1117                 5
1118             ],
1119             "replicate": 1,
1120             "condition": null,
1121             "hidden": false,
1122             "stopping_point": "1Aa",
1123             "tags": [],
1124             "made_for": "",
1125             "amplified_from_sample": null,
1126             "notes": "8/26/2009 14:46:56\tColor: White.",
1127             "undiluted_concentration": "2.17",
1128             "successful_pM": null,
1129             "experiment_type": 2,
1130             "antibody": null
1131         }
1132     },
1133   {"pk": 1182, "model": "experiments.lane",
1134    "fields": {
1135        "comment": "",
1136        "library": "11067",
1137        "cluster_estimate": 168000,
1138        "flowcell": 151,
1139        "lane_number": 6,
1140        "pM": "7"
1141        }
1142    },
1143     {
1144         "pk": "11067",
1145         "model": "samples.library",
1146         "fields": {
1147             "ten_nM_dilution": false,
1148             "gel_cut_size": 325,
1149             "library_name": "Paired End SP-BAC Barcoding test 250-300 bp",
1150             "creation_date": "2009-09-03",
1151             "cell_line": 1,
1152             "library_species": 10,
1153             "library_type": 2,
1154             "made_by": "Igor",
1155             "affiliations": [
1156                 1
1157             ],
1158             "replicate": 1,
1159             "condition": 1,
1160             "hidden": false,
1161             "stopping_point": "Done",
1162             "tags": [],
1163             "made_for": "Andy Cameron",
1164             "amplified_from_sample": null,
1165             "notes": "12 SP BACs",
1166             "undiluted_concentration": "1.45",
1167             "successful_pM": null,
1168             "experiment_type": 8,
1169             "antibody": null
1170         }
1171     },
1172   {"pk": 1183, "model": "experiments.lane",
1173    "fields": {
1174        "comment": "",
1175        "library": "11069",
1176        "cluster_estimate": 184000,
1177        "flowcell": 151,
1178        "lane_number": 7,
1179        "pM": "7"
1180        }
1181    },
1182     {
1183         "pk": "11069",
1184         "model": "samples.library",
1185         "fields": {
1186             "ten_nM_dilution": false,
1187             "gel_cut_size": 300,
1188             "library_name": "Paired End AG-3d-1 AG domain of floral meristem day 3, rep 1",
1189             "creation_date": "2009-09-02",
1190             "cell_line": null,
1191             "library_species": 6,
1192             "library_type": 2,
1193             "made_by": "Yuling Jiao",
1194             "affiliations": [
1195                 2
1196             ],
1197             "replicate": 1,
1198             "condition": null,
1199             "hidden": false,
1200             "stopping_point": "Done",
1201             "tags": [],
1202             "made_for": "",
1203             "amplified_from_sample": null,
1204             "notes": "nanodrop: Xng/ul.",
1205             "undiluted_concentration": "18.3",
1206             "successful_pM": null,
1207             "experiment_type": 4,
1208             "antibody": null
1209         }
1210     },
1211   {"pk": 1184, "model": "experiments.lane",
1212    "fields": {
1213        "comment": "",
1214        "library": "11070",
1215        "cluster_estimate": 182000,
1216        "flowcell": 151,
1217        "lane_number": 8,
1218        "pM": "7"
1219        }
1220    },
1221     {
1222         "pk": "11070",
1223         "model": "samples.library",
1224         "fields": {
1225             "ten_nM_dilution": false,
1226             "gel_cut_size": 300,
1227             "library_name": "Paired End AG-5d-1 AG domain of floral meristem day 5, rep 1",
1228             "creation_date": "2009-09-02",
1229             "cell_line": null,
1230             "library_species": 6,
1231             "library_type": 2,
1232             "made_by": "Yuling Jiao",
1233             "affiliations": [
1234                 3
1235             ],
1236             "replicate": 1,
1237             "condition": null,
1238             "hidden": false,
1239             "stopping_point": "Done",
1240             "tags": [],
1241             "made_for": "",
1242             "amplified_from_sample": null,
1243             "notes": "nanodrop: 40ng/ul\r\nCalibrated qbit with standards.\r\nMeasured 2ul library with qbit using HS kit.\r\n",
1244             "undiluted_concentration": "20.3",
1245             "successful_pM": null,
1246             "experiment_type": 4,
1247             "antibody": null
1248         }
1249      },
1250  {"pk": 200, "model": "experiments.flowcell",
1251   "fields": {
1252       "paired_end": true,
1253       "run_date": "2007-09-27T22:12:13-0800",
1254       "read_length": 36,
1255       "notes": "",
1256       "advanced_run": false,
1257       "control_lane": 2,
1258       "cluster_station": 3,
1259       "sequencer": 2,
1260       "flowcell_id": "30012AAXX (failed)"
1261       }
1262   },
1263   {"pk": 201, "model": "experiments.lane",
1264    "fields": {
1265        "comment": "",
1266        "library": "11070",
1267        "cluster_estimate": 182000,
1268        "flowcell": 200,
1269        "lane_number": 8,
1270        "pM": "7"
1271        }
1272    }
1273 ]