htsworkflow/frontend/experiments/fixtures/test_flowcells.json

   1 [
   2     {"pk": 1, "model": "samples.affiliation",
   3      "fields": {
   4          "users": [],
   5          "contact": "group 1",
   6          "name": "affiliation 1",
   7          "email": "pk1@example.com"
   8          }
   9      },
  10     {"pk": 2, "model": "samples.affiliation",
  11      "fields": {
  12          "users": [],
  13          "contact": "group 2",
  14          "name": "affiliation 2",
  15          "email": "pk2@example.com"
  16          }
  17      },
  18     {"pk": 3, "model": "samples.affiliation",
  19      "fields": {
  20          "users": [],
  21          "contact": "group 3",
  22          "name": "affiliation 3",
  23          "email": "pk3@example.com"
  24          }
  25      },
  26     {"pk": 4, "model": "samples.affiliation",
  27      "fields": {
  28          "users": [],
  29          "contact": "group 4",
  30          "name": "affiliation 4",
  31          "email": "pk1@example.com"
  32          }
  33      },
  34     {"pk": 5, "model": "samples.affiliation",
  35      "fields": {
  36          "users": [],
  37          "contact": "group 5",
  38          "name": "affiliation 5",
  39          "email": "pk5@example.com"
  40          }
  41      },
  42     {"pk": 5, "model": "auth.user",
  43    "fields": {
  44        "username": "test",
  45        "first_name": "",
  46        "last_name": "",
  47        "is_active": true,
  48        "is_superuser": false,
  49        "is_staff": false,
  50        "last_login": "2009-01-01 00:00:01",
  51        "groups": [],
  52        "user_permissions": [],
  53        "password": "sha1$foo$5e4eefec1144a04becfb7da79244f07c487fc345",
  54        "email": "",
  55        "date_joined": "2009-01-01 00:01:01"
  56        }
  57    },
  58   {"pk": 6, "model": "auth.user",
  59    "fields": {
  60        "username": "admintest",
  61        "first_name": "",
  62        "last_name": "",
  63        "is_active": true,
  64        "is_superuser": false,
  65        "is_staff": true,
  66        "last_login": "2009-01-01 00:00:01",
  67        "groups": [],
  68        "user_permissions": [],
  69        "password": "sha1$foo$5e4eefec1144a04becfb7da79244f07c487fc345",
  70        "email": "",
  71        "date_joined": "2009-01-01 00:01:01"
  72        }
  73    },
  74  {"pk": 1, "model": "experiments.clusterstation", "fields": {"name": "old"}},
  75  {"pk": 2, "model": "experiments.clusterstation", "fields": {"name": "loaner"}},
  76  {"pk": 3, "model": "experiments.clusterstation", "fields": {"name": "new"}},
  77  {"pk": 1, "model": "experiments.sequencer", "fields": {"name": "Rotifer (HWI-EAS229)"}},
  78  {"pk": 2, "model": "experiments.sequencer", "fields": {"name": "Tardigrade"}},
  79  {"pk": 3, "model": "experiments.sequencer", "fields": {"name": "Sequenced somewhere else."}},
  80  {"pk": 153, "model": "experiments.flowcell",
  81   "fields": {
  82       "paired_end": true,
  83       "run_date": "2009-09-11 22:12:13",
  84       "read_length": 75,
  85       "notes": "",
  86       "advanced_run": false,
  87       "control_lane": 2,
  88       "cluster_station": 3,
  89       "sequencer": 2,
  90       "flowcell_id": "303TUAAXX"
  91       }
  92   },
  93   {"pk": 1193, "model": "experiments.lane",
  94    "fields": {
  95        "comment": "No change in cluster numbers, despite slight increase in pM",
  96        "library": 10984,
  97        "cluster_estimate": 129000,
  98        "flowcell": 153,
  99        "lane_number": 1,
 100        "pM": "8"
 101        }
 102    },
 103   {"pk": 10984, "model": "samples.library",
 104         "fields": {
 105             "library_id": "10981",
 106             "ten_nM_dilution": false,
 107             "avg_lib_size": 400,
 108             "library_name": "Paired End Multiplexed Sp-BAC",
 109             "creation_date": "2009-07-21",
 110             "cell_line": 1,
 111             "library_species": 10,
 112             "library_type": null,
 113             "made_by": "Igor",
 114             "affiliations": [
 115                 1,2
 116             ],
 117             "replicate": 1,
 118             "condition": 1,
 119             "hidden": false,
 120             "stopping_point": "Done",
 121             "tags": [],
 122             "made_for": "Andy Cameron",
 123             "amplified_from_sample": null,
 124             "notes": "Combined 10957-10968",
 125             "undiluted_concentration": "5.1",
 126             "successful_pM": null,
 127             "experiment_type": 10,
 128             "antibody": null
 129         }
 130     },
 131   {"pk": 1194, "model": "experiments.lane",
 132    "fields": {
 133        "comment": "",
 134        "library": 11019,
 135        "cluster_estimate": 152000,
 136        "flowcell": 153,
 137        "lane_number": 2,
 138        "pM": "7"
 139        }
 140    },
 141     {
 142         "pk": 11019,
 143         "model": "samples.library",
 144         "fields": {
 145             "library_id": "11016",
 146             "ten_nM_dilution": false,
 147             "avg_lib_size": 325,
 148             "library_name": "Paired End Pfl #3 MP 7/24/9 a",
 149             "creation_date": "2009-08-06",
 150             "cell_line": 1,
 151             "library_species": 2,
 152             "library_type": 2,
 153             "made_by": "Lorian",
 154             "affiliations": [
 155                 2
 156             ],
 157             "replicate": 1,
 158             "condition": 1,
 159             "hidden": false,
 160             "stopping_point": "1Aa",
 161             "tags": [],
 162             "made_for": "",
 163             "amplified_from_sample": 11006,
 164             "notes": "7/31/2009 16:08:22\tColor: Blue",
 165             "undiluted_concentration": "35.5",
 166             "successful_pM": null,
 167             "experiment_type": 8,
 168             "antibody": null
 169         }
 170     },
 171   {"pk": 1195, "model": "experiments.lane",
 172    "fields": {
 173        "comment": "",
 174        "library": 11042,
 175        "cluster_estimate": 162000,
 176        "flowcell": 153,
 177        "lane_number": 3,
 178        "pM": "7"
 179        }
 180    },
 181     {
 182         "pk": 11042,
 183         "model": "samples.library",
 184         "fields": {
 185             "library_id": "SL039",
 186             "ten_nM_dilution": false,
 187             "avg_lib_size": 300,
 188             "library_name": "Paired ends 99 GM12892",
 189             "creation_date": "2009-08-25",
 190             "cell_line": 1,
 191             "library_species": 8,
 192             "library_type": 2,
 193             "made_by": "Brian Williams",
 194             "affiliations": [
 195                 3,4
 196             ],
 197             "replicate": 1,
 198             "condition": 1,
 199             "hidden": false,
 200             "stopping_point": "1Aa",
 201             "tags": [],
 202             "made_for": "Brian Williams",
 203             "amplified_from_sample": null,
 204             "notes": "fragment size = 300 bp, Amicon filtered\r\nnanodrop: 56.3",
 205             "undiluted_concentration": "28.7",
 206             "successful_pM": null,
 207             "experiment_type": 4,
 208             "antibody": null
 209         }
 210     },
 211   {"pk": 1196, "model": "experiments.lane",
 212    "fields": {
 213        "comment": "This lane's library had the second lowest concentration of all the libraries built at the same time (2.05ng/ul)",
 214        "library": 11063,
 215        "cluster_estimate": 24000,
 216        "flowcell": 153,
 217        "lane_number": 4,
 218        "pM": "7"
 219        }
 220    },
 221     {
 222         "pk": 11063,
 223         "model": "samples.library",
 224         "fields": {
 225             "library_id": "11060",
 226             "ten_nM_dilution": false,
 227             "avg_lib_size": 300,
 228             "library_name": "Paired ends 100 VC_CN_4_M_MBB1185_s1",
 229             "creation_date": "2009-09-01",
 230             "cell_line": 1,
 231             "library_species": 8,
 232             "library_type": 2,
 233             "made_by": "Brian Williams",
 234             "affiliations": [
 235                 5
 236             ],
 237             "replicate": 1,
 238             "condition": 1,
 239             "hidden": false,
 240             "stopping_point": "1Aa",
 241             "tags": [],
 242             "made_for": "Brian Williams",
 243             "amplified_from_sample": null,
 244             "notes": "300 bp gel fragment, Amicon filtered\r\nnanodrop: 24.2",
 245             "undiluted_concentration": "2.05",
 246             "successful_pM": null,
 247             "experiment_type": 4,
 248             "antibody": null
 249         }
 250     },
 251   {"pk": 1197, "model": "experiments.lane",
 252    "fields": {
 253        "comment": "",
 254        "library": 11064,
 255        "cluster_estimate": 140000,
 256        "flowcell": 153,
 257        "lane_number": 5,
 258        "pM": "7"
 259        }
 260    },
 261     {
 262         "pk": 11064,
 263         "model": "samples.library",
 264         "fields": {
 265             "library_id": "11061",
 266             "ten_nM_dilution": false,
 267             "avg_lib_size": 300,
 268             "library_name": "Paired ends 101 VC_CN_4_M_MBB1185_s2",
 269             "creation_date": "2009-09-01",
 270             "cell_line": 1,
 271             "library_species": 8,
 272             "library_type": 2,
 273             "made_by": "Brian Williams",
 274             "affiliations": [
 275                 2,4
 276             ],
 277             "replicate": 1,
 278             "condition": 1,
 279             "hidden": false,
 280             "stopping_point": "1Aa",
 281             "tags": [],
 282             "made_for": "Brian Williams",
 283             "amplified_from_sample": null,
 284             "notes": "300 bp gel fragment, Amicon filtered\r\nnanodrop: 33.1",
 285             "undiluted_concentration": "12.9",
 286             "successful_pM": null,
 287             "experiment_type": 4,
 288             "antibody": null
 289         }
 290     },
 291   {"pk": 1198, "model": "experiments.lane",
 292    "fields": {
 293        "comment": "This lane's library had the lowest concentration of all the libraries built at the same time (1.2ng/ul)",
 294        "library": 11065,
 295        "cluster_estimate": 2000,
 296        "flowcell": 153,
 297        "lane_number": 6,
 298        "pM": "7"
 299        }
 300    },
 301     {
 302         "pk": 11065,
 303         "model": "samples.library",
 304         "fields": {
 305             "library_id": "11062",
 306             "ten_nM_dilution": false,
 307             "avg_lib_size": 300,
 308             "library_name": "Paired ends 102 VC_AU_8_M_MBB4721_s1",
 309             "creation_date": "2009-09-01",
 310             "cell_line": 1,
 311             "library_species": 8,
 312             "library_type": 2,
 313             "made_by": "Brian Williams",
 314             "affiliations": [
 315                 4,5
 316             ],
 317             "replicate": 1,
 318             "condition": 1,
 319             "hidden": false,
 320             "stopping_point": "1Aa",
 321             "tags": [],
 322             "made_for": "Brian Williams",
 323             "amplified_from_sample": null,
 324             "notes": "300 bp gel fragment, Amicon filtered\r\nnanodrop: 13.9",
 325             "undiluted_concentration": "1.2",
 326             "successful_pM": null,
 327             "experiment_type": 4,
 328             "antibody": null
 329         }
 330     },
 331   {"pk": 1199, "model": "experiments.lane",
 332    "fields": {
 333        "comment": "",
 334        "library": 11066,
 335        "cluster_estimate": 120000,
 336        "flowcell": 153,
 337        "lane_number": 7,
 338        "pM": "7"
 339        }
 340    },
 341     {
 342         "pk": 11066,
 343         "model": "samples.library",
 344         "fields": {
 345             "library_id": "11063",
 346             "ten_nM_dilution": false,
 347             "avg_lib_size": 300,
 348             "library_name": "Paired ends 103 VC_AU_8_M_MBB4721_s2",
 349             "creation_date": "2009-09-01",
 350             "cell_line": 1,
 351             "library_species": 8,
 352             "library_type": 2,
 353             "made_by": "Brian Williams",
 354             "affiliations": [
 355                 1,3
 356             ],
 357             "replicate": 1,
 358             "condition": 1,
 359             "hidden": false,
 360             "stopping_point": "1Aa",
 361             "tags": [],
 362             "made_for": "Brian Williams",
 363             "amplified_from_sample": null,
 364             "notes": "300 bp gel fragment, Amicon filtered\r\nnanodrop: 46.9",
 365             "undiluted_concentration": "24.5",
 366             "successful_pM": null,
 367             "experiment_type": 4,
 368             "antibody": null
 369         }
 370     },
 371   {"pk": 1200, "model": "experiments.lane",
 372    "fields": {
 373        "comment": "This lane's library had the third lowest concentration of all the libraries built at the same time (5.21ng/ul), but gave perfectly normal cluster numbers",
 374        "library": 11067,
 375        "cluster_estimate": 157000,
 376        "flowcell": 153,
 377        "lane_number": 8,
 378        "pM": "7"
 379        }
 380    },
 381     {
 382         "pk": 11067,
 383         "model": "samples.library",
 384         "fields": {
 385             "library_id": "11064",
 386             "ten_nM_dilution": false,
 387             "avg_lib_size": 300,
 388             "library_name": "Paired ends 104 VC_CN_7_M_MBB4898_s1",
 389             "creation_date": "2009-09-01",
 390             "cell_line": 1,
 391             "library_species": 8,
 392             "library_type": 2,
 393             "made_by": "Brian Williams",
 394             "affiliations": [
 395                 3,5
 396             ],
 397             "replicate": 1,
 398             "condition": 1,
 399             "hidden": false,
 400             "stopping_point": "1Aa",
 401             "tags": [],
 402             "made_for": "Brian Williams",
 403             "amplified_from_sample": null,
 404             "notes": "300 bp gel fragment, Amicon filtered\r\nnanodrop: 20.4",
 405             "undiluted_concentration": "5.21",
 406             "successful_pM": null,
 407             "experiment_type": 4,
 408             "antibody": null
 409         }
 410     },
 411    {"pk": 152, "model": "experiments.flowcell",
 412    "fields": {
 413        "paired_end": false,
 414        "run_date": "2009-09-10 18:30:15",
 415        "read_length": 38,
 416        "notes": "328461 4897273 RGT-0248815\r\n328479 4897265 RGT-0249274\r\n330421 4822845 SR-0005496",
 417        "advanced_run": false,
 418        "control_lane": 4,
 419        "cluster_station": 3,
 420        "sequencer": 1,
 421        "flowcell_id": "42JTNAAXX"
 422        }
 423    },
 424   {"pk": 1185, "model": "experiments.lane",
 425    "fields": {
 426        "comment": "",
 427        "library": 11038,
 428        "cluster_estimate": 174000,
 429        "flowcell": 152,
 430        "lane_number": 1,
 431        "pM": "7"
 432        }
 433    },
 434     {
 435         "pk": 11038,
 436         "model": "samples.library",
 437         "fields": {
 438             "library_id": "11035",
 439             "ten_nM_dilution": false,
 440             "avg_lib_size": 300,
 441             "library_name": "Paired ends 95 Gilberto_d3_control_LTA",
 442             "creation_date": "2009-08-25",
 443             "cell_line": 1,
 444             "library_species": 9,
 445             "library_type": 2,
 446             "made_by": "Brian Williams",
 447             "affiliations": [
 448                 3
 449             ],
 450             "replicate": 1,
 451             "condition": 1,
 452             "hidden": false,
 453             "stopping_point": "1Aa",
 454             "tags": [],
 455             "made_for": "Brian Williams",
 456             "amplified_from_sample": null,
 457             "notes": "fragment size = 300 bp, Amicon filtered\r\nnanodrop: 67.1",
 458             "undiluted_concentration": "28.5",
 459             "successful_pM": null,
 460             "experiment_type": 4,
 461             "antibody": null
 462         }
 463     },
 464   {"pk": 1186, "model": "experiments.lane",
 465    "fields": {
 466        "comment": "",
 467        "library": 11040,
 468        "cluster_estimate": 173000,
 469        "flowcell": 152,
 470        "lane_number": 2,
 471        "pM": "7"
 472        }
 473    },
 474     {
 475         "pk": 11040,
 476         "model": "samples.library",
 477         "fields": {
 478             "library_id": "11037",
 479             "ten_nM_dilution": false,
 480             "avg_lib_size": 300,
 481             "library_name": "Paired ends 97 Kuntz_PDHT",
 482             "creation_date": "2009-08-25",
 483             "cell_line": 1,
 484             "library_species": 3,
 485             "library_type": 2,
 486             "made_by": "Brian Williams",
 487             "affiliations": [
 488                 4
 489             ],
 490             "replicate": 1,
 491             "condition": 1,
 492             "hidden": false,
 493             "stopping_point": "1Aa",
 494             "tags": [],
 495             "made_for": "Brian Williams",
 496             "amplified_from_sample": null,
 497             "notes": "fragment size = 300 bp, Amicon filtered\r\nnanodrop: 52.7",
 498             "undiluted_concentration": "25.5",
 499             "successful_pM": null,
 500             "experiment_type": 4,
 501             "antibody": null
 502         }
 503     },
 504   {"pk": 1187, "model": "experiments.lane",
 505    "fields": {
 506        "comment": "",
 507        "library": 11048,
 508        "cluster_estimate": 198000,
 509        "flowcell": 152,
 510        "lane_number": 3,
 511        "pM": "7"
 512        }
 513    },
 514     {
 515         "pk": 11048,
 516         "model": "samples.library",
 517         "fields": {
 518             "library_id": "11045",
 519             "ten_nM_dilution": false,
 520             "avg_lib_size": 250,
 521             "library_name": "FLDN1 8/3/9 anti-AcH3 chip B6 a",
 522             "creation_date": "2009-08-26",
 523             "cell_line": null,
 524             "library_species": 9,
 525             "library_type": 1,
 526             "made_by": "Lorian",
 527             "affiliations": [
 528                 5
 529             ],
 530             "replicate": 1,
 531             "condition": null,
 532             "hidden": false,
 533             "stopping_point": "2A",
 534             "tags": [],
 535             "made_for": "",
 536             "amplified_from_sample": 11044,
 537             "notes": "8/21/2009 11:57:54\tColor: Yellow",
 538             "undiluted_concentration": "20.5",
 539             "successful_pM": null,
 540             "experiment_type": 2,
 541             "antibody": null
 542         }
 543     },
 544   {"pk": 1188, "model": "experiments.lane",
 545    "fields": {
 546        "comment": "",
 547        "library": 11049,
 548        "cluster_estimate": 212000,
 549        "flowcell": 152,
 550        "lane_number": 4,
 551        "pM": "7"}
 552    },
 553     {
 554         "pk": 11049,
 555         "model": "samples.library",
 556         "fields": {
 557             "library_id": "11046",
 558             "ten_nM_dilution": false,
 559             "avg_lib_size": 250,
 560             "library_name": "FLDN1 7/8/9 anti-DiMeH3K4 chip B6 a",
 561             "creation_date": "2009-08-26",
 562             "cell_line": null,
 563             "library_species": 9,
 564             "library_type": 1,
 565             "made_by": "Lorian",
 566             "affiliations": [
 567                 6
 568             ],
 569             "replicate": 1,
 570             "condition": null,
 571             "hidden": false,
 572             "stopping_point": "2A",
 573             "tags": [],
 574             "made_for": "",
 575             "amplified_from_sample": 11045,
 576             "notes": "8/21/2009 11:57:54\tColor: Blue",
 577             "undiluted_concentration": "23.9",
 578             "successful_pM": null,
 579             "experiment_type": 2,
 580             "antibody": null
 581         }
 582     },
 583   {"pk": 1189, "model": "experiments.lane",
 584    "fields": {
 585        "comment": "",
 586        "library": 11057,
 587        "cluster_estimate": 49000,
 588        "flowcell": 152,
 589        "lane_number": 5,
 590        "pM": "7"
 591        }
 592    },
 593     {
 594         "pk": 11057,
 595         "model": "samples.library",
 596         "fields": {
 597             "library_id": "11054",
 598             "ten_nM_dilution": false,
 599             "avg_lib_size": 225,
 600             "library_name": "HNDHT HLH hnd-1 strain HT115 fed anti-hlh-1 2% fix plate a",
 601             "creation_date": "2009-08-31",
 602             "cell_line": null,
 603             "library_species": 3,
 604             "library_type": 1,
 605             "made_by": "Lorian",
 606             "affiliations": [
 607                 1
 608             ],
 609             "replicate": 1,
 610             "condition": null,
 611             "hidden": false,
 612             "stopping_point": "1Aa",
 613             "tags": [],
 614             "made_for": "",
 615             "amplified_from_sample": 11051,
 616             "notes": "8/26/2009 14:46:56\tColor: Purple",
 617             "undiluted_concentration": "1.47",
 618             "successful_pM": null,
 619             "experiment_type": 2,
 620             "antibody": null
 621         }
 622     },
 623   {"pk": 1190, "model": "experiments.lane",
 624    "fields": {
 625        "comment": "",
 626        "library": 11059,
 627        "cluster_estimate": 48000,
 628        "flowcell": 152,
 629        "lane_number": 6,
 630        "pM": "7"
 631        }
 632    },
 633     {
 634         "pk": 11059,
 635         "model": "samples.library",
 636         "fields": {
 637             "library_id": "11056",
 638             "ten_nM_dilution": false,
 639             "avg_lib_size": 225,
 640             "library_name": "HNDM3 HLH hnd-1 strain mex-3 fed anti-hlh-1 2% fix plate a",
 641             "creation_date": "2009-08-31",
 642             "cell_line": null,
 643             "library_species": 3,
 644             "library_type": 1,
 645             "made_by": "Lorian",
 646             "affiliations": [
 647                 2
 648             ],
 649             "replicate": 1,
 650             "condition": null,
 651             "hidden": false,
 652             "stopping_point": "1Aa",
 653             "tags": [],
 654             "made_for": "",
 655             "amplified_from_sample": 11053,
 656             "notes": "8/26/2009 14:46:56\tColor: Black",
 657             "undiluted_concentration": "1.42",
 658             "successful_pM": null,
 659             "experiment_type": 2,
 660             "antibody": null
 661         }
 662     },
 663   {"pk": 1191, "model": "experiments.lane",
 664    "fields": {
 665        "comment": "",
 666        "library": 11060,
 667        "cluster_estimate": 4000,
 668        "flowcell": 152,
 669        "lane_number": 7,
 670        "pM": "7"
 671        }
 672    },
 673     {
 674         "pk": 11060,
 675         "model": "samples.library",
 676         "fields": {
 677             "library_id": "11057",
 678             "ten_nM_dilution": false,
 679             "avg_lib_size": 225,
 680             "library_name": "HNDM3 4H8 hnd-1 strain mex-3 fed 4H8 2% fix plate a",
 681             "creation_date": "2009-08-31",
 682             "cell_line": null,
 683             "library_species": 3,
 684             "library_type": 1,
 685             "made_by": "Lorian",
 686             "affiliations": [
 687                 3
 688             ],
 689             "replicate": 1,
 690             "condition": null,
 691             "hidden": false,
 692             "stopping_point": "1Aa",
 693             "tags": [],
 694             "made_for": "",
 695             "amplified_from_sample": 11054,
 696             "notes": "8/26/2009 14:46:56\tColor: Orange.",
 697             "undiluted_concentration": "1.3",
 698             "successful_pM": null,
 699             "experiment_type": 2,
 700             "antibody": null
 701         }
 702     },
 703   {"pk": 1192, "model": "experiments.lane",
 704    "fields": {
 705        "comment": "",
 706        "library": 11068,
 707        "cluster_estimate": 5000,
 708        "flowcell": 152,
 709        "lane_number": 8,
 710        "pM": "7"
 711        }
 712    },
 713     {
 714         "pk": 11068,
 715         "model": "samples.library",
 716         "fields": {
 717             "library_id": "11065",
 718             "ten_nM_dilution": false,
 719             "avg_lib_size": 300,
 720             "library_name": "Paired ends 105 Kuntz PDM3",
 721             "creation_date": "2009-09-01",
 722             "cell_line": 1,
 723             "library_species": 3,
 724             "library_type": 2,
 725             "made_by": "Brian Williams",
 726             "affiliations": [
 727                 4
 728             ],
 729             "replicate": 1,
 730             "condition": 1,
 731             "hidden": false,
 732             "stopping_point": "1Aa",
 733             "tags": [],
 734             "made_for": "Brian Williams",
 735             "amplified_from_sample": null,
 736             "notes": "300 bp gel fragment, Amicon filtered\r\nnanodrop: 30.5",
 737             "undiluted_concentration": "2.47",
 738             "successful_pM": null,
 739             "experiment_type": 4,
 740             "antibody": null
 741         }
 742     },
 743   {"pk": 151, "model": "experiments.flowcell",
 744    "fields": {
 745        "paired_end": false,
 746        "run_date": "2009-09-08 15:39:28",
 747        "read_length": 38,
 748        "notes": "Rebuild of broken flowcell\r\n\r\n328461 4820241 RGT-0215719\r\n328479 4897265 RGT-0249510\r\n330421 4822845 SR-0005402\r\n",
 749        "advanced_run": false,
 750        "control_lane": 5,
 751        "cluster_station": 3,
 752        "sequencer": 2,
 753        "flowcell_id": "42JU1AAXX"
 754        }
 755    },
 756   {"pk": 1177, "model": "experiments.lane",
 757    "fields": {
 758        "comment": "",
 759        "library": 11037,
 760        "cluster_estimate": 177000,
 761        "flowcell": 151,
 762        "lane_number": 1,
 763        "pM": "7"
 764        }
 765    },
 766   {"pk": 1178, "model": "experiments.lane",
 767    "fields": {
 768        "comment": "",
 769        "library": 11039,
 770        "cluster_estimate": 169000,
 771        "flowcell": 151,
 772        "lane_number": 2,
 773        "pM": "7"
 774        }
 775    },
 776     {
 777         "pk": 11039,
 778         "model": "samples.library",
 779         "fields": {
 780             "library_id": "11036",
 781             "ten_nM_dilution": false,
 782             "avg_lib_size": 300,
 783             "library_name": "Paired ends 96 Kuntz_PDE1",
 784             "creation_date": "2009-08-25",
 785             "cell_line": 1,
 786             "library_species": 3,
 787             "library_type": 2,
 788             "made_by": "Brian Williams",
 789             "affiliations": [
 790                 5
 791             ],
 792             "replicate": 1,
 793             "condition": 1,
 794             "hidden": false,
 795             "stopping_point": "1Aa",
 796             "tags": [],
 797             "made_for": "Brian Williams",
 798             "amplified_from_sample": null,
 799             "notes": "fragment size = 300 bp",
 800             "undiluted_concentration": "30.6",
 801             "successful_pM": null,
 802             "experiment_type": 4,
 803             "antibody": null
 804         }
 805     },
 806     {
 807         "pk": 11037,
 808         "model": "samples.library",
 809         "fields": {
 810             "library_id": "11034",
 811             "ten_nM_dilution": false,
 812             "avg_lib_size": 300,
 813             "library_name": "Paired ends 94 Gilberto_d3_denerv_LTA",
 814             "creation_date": "2009-08-25",
 815             "cell_line": 1,
 816             "library_species": 9,
 817             "library_type": 2,
 818             "made_by": "Brian Williams",
 819             "affiliations": [
 820                 1
 821             ],
 822             "replicate": 1,
 823             "condition": 1,
 824             "hidden": false,
 825             "stopping_point": "1Aa",
 826             "tags": [],
 827             "made_for": "Brian Williams",
 828             "amplified_from_sample": null,
 829             "notes": "fragment size = 300 bp",
 830             "undiluted_concentration": "27",
 831             "successful_pM": null,
 832             "experiment_type": 4,
 833             "antibody": null
 834         }
 835     },
 836     {
 837         "pk": 11047,
 838         "model": "samples.library",
 839         "fields": {
 840             "library_id": "11044",
 841             "ten_nM_dilution": false,
 842             "avg_lib_size": 225,
 843             "library_name": "p300 60h C2 FA KF 12/22/8 a",
 844             "creation_date": "2009-08-26",
 845             "cell_line": null,
 846             "library_species": 9,
 847             "library_type": 1,
 848             "made_by": "Lorian",
 849             "affiliations": [
 850                 2
 851             ],
 852             "replicate": 1,
 853             "condition": null,
 854             "hidden": false,
 855             "stopping_point": "2A",
 856             "tags": [],
 857             "made_for": "",
 858             "amplified_from_sample": 11043,
 859             "notes": "8/21/2009 11:57:54\tColor: Orange",
 860             "undiluted_concentration": "22.4",
 861             "successful_pM": null,
 862             "experiment_type": 2,
 863             "antibody": null
 864         }
 865     },
 866   {"pk": 1179,
 867    "model": "experiments.lane",
 868    "fields": {
 869        "comment": "",
 870        "library": 11047,
 871        "cluster_estimate": 196000,
 872        "flowcell": 151,
 873        "lane_number": 3,
 874        "pM": "7"
 875        }
 876    },
 877     {
 878         "pk": 11047,
 879         "model": "samples.library",
 880         "fields": {
 881             "library_id": "11044",
 882             "ten_nM_dilution": false,
 883             "avg_lib_size": 225,
 884             "library_name": "p300 60h C2 FA KF 12/22/8 a",
 885             "creation_date": "2009-08-26",
 886             "cell_line": null,
 887             "library_species": 9,
 888             "library_type": 1,
 889             "made_by": "Lorian",
 890             "affiliations": [
 891                 3
 892             ],
 893             "replicate": 1,
 894             "condition": null,
 895             "hidden": false,
 896             "stopping_point": "2A",
 897             "tags": [],
 898             "made_for": "",
 899             "amplified_from_sample": 11043,
 900             "notes": "8/21/2009 11:57:54\tColor: Orange.",
 901             "undiluted_concentration": "22.4",
 902             "successful_pM": null,
 903             "experiment_type": 2,
 904             "antibody": null
 905         }
 906     },
 907   {"pk": 1180, "model": "experiments.lane",
 908    "fields": {
 909        "comment": "",
 910        "library": 11050,
 911        "cluster_estimate": 200000,
 912        "flowcell": 151,
 913        "lane_number": 4,
 914        "pM": "7"
 915        }
 916    },
 917     {
 918         "pk": 11050,
 919         "model": "samples.library",
 920         "fields": {
 921             "library_id": "11047",
 922             "ten_nM_dilution": false,
 923             "avg_lib_size": 250,
 924             "library_name": "FLDN1 7/8/9 anti-TriMeH3K27 chip B6 a",
 925             "creation_date": "2009-08-26",
 926             "cell_line": null,
 927             "library_species": 9,
 928             "library_type": 1,
 929             "made_by": "Lorian",
 930             "affiliations": [
 931                 4
 932             ],
 933             "replicate": 1,
 934             "condition": null,
 935             "hidden": false,
 936             "stopping_point": "2A",
 937             "tags": [],
 938             "made_for": "",
 939             "amplified_from_sample": 11046,
 940             "notes": "8/21/2009 11:57:54\tColor: Green",
 941             "undiluted_concentration": "24.9",
 942             "successful_pM": null,
 943             "experiment_type": 2,
 944             "antibody": null
 945         }
 946     },
 947   {"pk": 1181, "model": "experiments.lane",
 948    "fields": {
 949        "comment": "",
 950        "library": 11058,
 951        "cluster_estimate": 104000,
 952        "flowcell": 151,
 953        "lane_number": 5,
 954        "pM": "7"
 955        }
 956    },
 957     {
 958         "pk": 11058,
 959         "model": "samples.library",
 960         "fields": {
 961             "library_id": "11055",
 962             "ten_nM_dilution": false,
 963             "avg_lib_size": 225,
 964             "library_name": "HNDHT 4H8 hnd-1 strain HT115 fed 4H8 2% fix plate a",
 965             "creation_date": "2009-08-31",
 966             "cell_line": null,
 967             "library_species": 3,
 968             "library_type": 1,
 969             "made_by": "Lorian",
 970             "affiliations": [
 971                 5
 972             ],
 973             "replicate": 1,
 974             "condition": null,
 975             "hidden": false,
 976             "stopping_point": "1Aa",
 977             "tags": [],
 978             "made_for": "",
 979             "amplified_from_sample": 11052,
 980             "notes": "8/26/2009 14:46:56\tColor: White.",
 981             "undiluted_concentration": "2.17",
 982             "successful_pM": null,
 983             "experiment_type": 2,
 984             "antibody": null
 985         }
 986     },
 987   {"pk": 1182, "model": "experiments.lane",
 988    "fields": {
 989        "comment": "",
 990        "library": 11070,
 991        "cluster_estimate": 168000,
 992        "flowcell": 151,
 993        "lane_number": 6,
 994        "pM": "7"
 995        }
 996    },
 997     {
 998         "pk": 11070,
 999         "model": "samples.library",
1000         "fields": {
1001             "library_id": "11067",
1002             "ten_nM_dilution": false,
1003             "avg_lib_size": 325,
1004             "library_name": "Paired End SP-BAC Barcoding test 250-300 bp",
1005             "creation_date": "2009-09-03",
1006             "cell_line": 1,
1007             "library_species": 10,
1008             "library_type": 2,
1009             "made_by": "Igor",
1010             "affiliations": [
1011                 1
1012             ],
1013             "replicate": 1,
1014             "condition": 1,
1015             "hidden": false,
1016             "stopping_point": "Done",
1017             "tags": [],
1018             "made_for": "Andy Cameron",
1019             "amplified_from_sample": null,
1020             "notes": "12 SP BACs",
1021             "undiluted_concentration": "1.45",
1022             "successful_pM": null,
1023             "experiment_type": 8,
1024             "antibody": null
1025         }
1026     },
1027   {"pk": 1183, "model": "experiments.lane",
1028    "fields": {
1029        "comment": "",
1030        "library": 11072,
1031        "cluster_estimate": 184000,
1032        "flowcell": 151,
1033        "lane_number": 7,
1034        "pM": "7"
1035        }
1036    },
1037     {
1038         "pk": 11072,
1039         "model": "samples.library",
1040         "fields": {
1041             "library_id": "11069",
1042             "ten_nM_dilution": false,
1043             "avg_lib_size": 300,
1044             "library_name": "Paired End AG-3d-1 AG domain of floral meristem day 3, rep 1",
1045             "creation_date": "2009-09-02",
1046             "cell_line": null,
1047             "library_species": 6,
1048             "library_type": 2,
1049             "made_by": "Yuling Jiao",
1050             "affiliations": [
1051                 2
1052             ],
1053             "replicate": 1,
1054             "condition": null,
1055             "hidden": false,
1056             "stopping_point": "Done",
1057             "tags": [],
1058             "made_for": "",
1059             "amplified_from_sample": null,
1060             "notes": "nanodrop: Xng/ul.",
1061             "undiluted_concentration": "18.3",
1062             "successful_pM": null,
1063             "experiment_type": 4,
1064             "antibody": null
1065         }
1066     },
1067   {"pk": 1184, "model": "experiments.lane",
1068    "fields": {
1069        "comment": "",
1070        "library": 11073,
1071        "cluster_estimate": 182000,
1072        "flowcell": 151,
1073        "lane_number": 8,
1074        "pM": "7"
1075        }
1076    },
1077     {
1078         "pk": 11073,
1079         "model": "samples.library",
1080         "fields": {
1081             "library_id": "11070",
1082             "ten_nM_dilution": false,
1083             "avg_lib_size": 300,
1084             "library_name": "Paired End AG-5d-1 AG domain of floral meristem day 5, rep 1",
1085             "creation_date": "2009-09-02",
1086             "cell_line": null,
1087             "library_species": 6,
1088             "library_type": 2,
1089             "made_by": "Yuling Jiao",
1090             "affiliations": [
1091                 3
1092             ],
1093             "replicate": 1,
1094             "condition": null,
1095             "hidden": false,
1096             "stopping_point": "Done",
1097             "tags": [],
1098             "made_for": "",
1099             "amplified_from_sample": null,
1100             "notes": "nanodrop: 40ng/ul\r\nCalibrated qbit with standards.\r\nMeasured 2ul library with qbit using HS kit.\r\n",
1101             "undiluted_concentration": "20.3",
1102             "successful_pM": null,
1103             "experiment_type": 4,
1104             "antibody": null
1105         }
1106      }
1107
1108 ]