htsworkflow/frontend/experiments/fixtures/test_flowcells.json

   1 [
   2     {"pk": 5, "model": "auth.user",
   3    "fields": {
   4        "username": "test",
   5        "first_name": "",
   6        "last_name": "",
   7        "is_active": true,
   8        "is_superuser": false,
   9        "is_staff": false,
  10        "last_login": "2009-01-01 00:00:01",
  11        "groups": [],
  12        "user_permissions": [],
  13        "password": "sha1$foo$5e4eefec1144a04becfb7da79244f07c487fc345",
  14        "email": "",
  15        "date_joined": "2009-01-01 00:01:01"
  16        }
  17    },
  18    {"pk": 5, "model": "samples.htsuser",
  19     "fields" : {}
  20    },
  21    {"pk": 6, "model": "auth.user",
  22    "fields": {
  23        "username": "admintest",
  24        "first_name": "",
  25        "last_name": "",
  26        "is_active": true,
  27        "is_superuser": false,
  28        "is_staff": true,
  29        "last_login": "2009-01-01 00:00:01",
  30        "groups": [],
  31        "user_permissions": [],
  32        "password": "sha1$foo$5e4eefec1144a04becfb7da79244f07c487fc345",
  33        "email": "",
  34        "date_joined": "2009-01-01 00:01:01"
  35        }
  36    },
  37    {"pk": 6, "model": "samples.htsuser",
  38     "fields" : {}
  39    },
  40    {"pk": 7, "model": "auth.user",
  41    "fields": {
  42        "username": "supertest",
  43        "first_name": "",
  44        "last_name": "",
  45        "is_active": true,
  46        "is_superuser": true,
  47        "is_staff": true,
  48        "last_login": "2009-01-01 00:00:01",
  49        "groups": [],
  50        "user_permissions": [],
  51        "password": "sha1$foo$5e4eefec1144a04becfb7da79244f07c487fc345",
  52        "email": "",
  53        "date_joined": "2009-01-01 00:01:01"
  54        }
  55    },
  56    {"pk": 7, "model": "samples.htsuser",
  57     "fields" : {}
  58    },
  59    {"pk": 1, "model": "samples.affiliation",
  60      "fields": {
  61          "users": [5],
  62          "contact": "group 1",
  63          "name": "affiliation 1",
  64          "email": "pk1@example.com"
  65          }
  66      },
  67     {"pk": 2, "model": "samples.affiliation",
  68      "fields": {
  69          "users": [6],
  70          "contact": "group 2",
  71          "name": "affiliation 2",
  72          "email": "pk2@example.com"
  73          }
  74      },
  75     {"pk": 3, "model": "samples.affiliation",
  76      "fields": {
  77          "users": [],
  78          "contact": "group 3",
  79          "name": "affiliation 3",
  80          "email": "pk3@example.com"
  81          }
  82      },
  83     {"pk": 4, "model": "samples.affiliation",
  84      "fields": {
  85          "users": [],
  86          "contact": "group 4",
  87          "name": "affiliation 4",
  88          "email": "pk1@example.com"
  89          }
  90      },
  91     {"pk": 5, "model": "samples.affiliation",
  92      "fields": {
  93          "users": [],
  94          "contact": "group 5",
  95          "name": "affiliation 5",
  96          "email": "pk5@example.com"
  97          }
  98      },
  99  {"pk": 1, "model": "experiments.clusterstation", "fields": {"name": "old"}},
 100  {"pk": 2, "model": "experiments.clusterstation", "fields": {"name": "loaner"}},
 101  {"pk": 3, "model": "experiments.clusterstation", "fields": {"name": "new"}},
 102  {"pk": 1, "model": "experiments.sequencer",
 103   "fields": { "name": "Rotifer (HWI-EAS229)" }},
 104  {"pk": 2, "model": "experiments.sequencer",
 105   "fields": {"name": "Tardigrade",
 106              "instrument_name": "ILLUMINA-EC5D15",
 107              "model": "Illumina Genome Analyzer IIx"}
 108  },
 109  {"pk": 3, "model": "experiments.sequencer", "fields": {"name": "Sequenced somewhere else."}},
 110  {"pk": 153, "model": "experiments.flowcell",
 111   "fields": {
 112       "paired_end": true,
 113       "run_date": "2007-09-27 22:12:13",
 114       "read_length": 36,
 115       "notes": "",
 116       "advanced_run": false,
 117       "control_lane": 2,
 118       "cluster_station": 3,
 119       "sequencer": 2,
 120       "flowcell_id": "FC12150"
 121       }
 122   },
 123   {"pk": 1193, "model": "experiments.lane",
 124    "fields": {
 125        "comment": "No change in cluster numbers, despite slight increase in pM",
 126        "library": "10981",
 127        "cluster_estimate": 129000,
 128        "flowcell": 153,
 129        "lane_number": 1,
 130        "pM": "8"
 131        }
 132    },
 133    {"pk": 1192, "model": "experiments.lane",
 134     "fields": {
 135         "comment": "Other library",
 136         "library": "11070",
 137         "cluster_estimate": 132000,
 138         "flowcell": 153,
 139         "lane_number": 1,
 140         "pM": "7"
 141         }
 142     },
 143
 144   {"pk": "10981", "model": "samples.library",
 145         "fields": {
 146             "ten_nM_dilution": false,
 147             "gel_cut_size": 400,
 148             "library_name": "Paired End Multiplexed Sp-BAC",
 149             "creation_date": "2009-07-21",
 150             "cell_line": 1,
 151             "library_species": 10,
 152             "library_type": null,
 153             "made_by": "Igor",
 154             "affiliations": [
 155                 1,2
 156             ],
 157             "replicate": 1,
 158             "condition": 1,
 159             "hidden": false,
 160             "stopping_point": "Done",
 161             "tags": [],
 162             "made_for": "Andy Cameron",
 163             "amplified_from_sample": null,
 164             "notes": "Combined 10957-10968",
 165             "undiluted_concentration": "5.1",
 166             "successful_pM": null,
 167             "experiment_type": 10,
 168             "antibody": null
 169         }
 170     },
 171   {"pk": 1194, "model": "experiments.lane",
 172    "fields": {
 173        "comment": "",
 174        "library": "11016",
 175        "cluster_estimate": 152000,
 176        "flowcell": 153,
 177        "lane_number": 2,
 178        "pM": "7"
 179        }
 180    },
 181     {
 182         "pk": "11016",
 183         "model": "samples.library",
 184         "fields": {
 185             "ten_nM_dilution": false,
 186             "gel_cut_size": 325,
 187             "library_name": "Paired End Pfl #3 MP 7/24/9 a",
 188             "creation_date": "2009-08-06",
 189             "cell_line": 1,
 190             "library_species": 2,
 191             "library_type": 2,
 192             "made_by": "Lorian",
 193             "affiliations": [
 194                 2
 195             ],
 196             "replicate": 1,
 197             "condition": 1,
 198             "hidden": false,
 199             "stopping_point": "1Aa",
 200             "tags": [],
 201             "made_for": "",
 202             "amplified_from_sample": 11006,
 203             "notes": "7/31/2009 16:08:22\tColor: Blue",
 204             "undiluted_concentration": "35.5",
 205             "successful_pM": null,
 206             "experiment_type": 8,
 207             "antibody": null
 208         }
 209     },
 210   {"pk": 1195, "model": "experiments.lane",
 211    "fields": {
 212        "comment": "",
 213        "library": "SL039",
 214        "cluster_estimate": 162000,
 215        "flowcell": 153,
 216        "lane_number": 3,
 217        "pM": "7"
 218        }
 219    },
 220     {
 221         "pk": "SL039",
 222         "model": "samples.library",
 223         "fields": {
 224             "ten_nM_dilution": false,
 225             "gel_cut_size": 300,
 226             "library_name": "Paired ends 99 GM12892",
 227             "creation_date": "2009-08-25",
 228             "cell_line": 1,
 229             "library_species": 8,
 230             "library_type": 2,
 231             "made_by": "Brian Williams",
 232             "affiliations": [
 233                 3,4
 234             ],
 235             "replicate": 1,
 236             "condition": 1,
 237             "hidden": false,
 238             "stopping_point": "1Aa",
 239             "tags": [],
 240             "made_for": "Brian Williams",
 241             "amplified_from_sample": null,
 242             "notes": "fragment size = 300 bp, Amicon filtered\r\nnanodrop: 56.3",
 243             "undiluted_concentration": "28.7",
 244             "successful_pM": null,
 245             "experiment_type": 4,
 246             "antibody": null
 247         }
 248     },
 249   {"pk": 1196, "model": "experiments.lane",
 250    "fields": {
 251        "comment": "This lane's library had the second lowest concentration of all the libraries built at the same time (2.05ng/ul)",
 252        "library": "11060",
 253        "cluster_estimate": 24000,
 254        "flowcell": 153,
 255        "lane_number": 4,
 256        "pM": "7"
 257        }
 258    },
 259     {
 260         "pk": "11060",
 261         "model": "samples.library",
 262         "fields": {
 263             "ten_nM_dilution": false,
 264             "gel_cut_size": 300,
 265             "library_name": "Paired ends 100 VC_CN_4_M_MBB1185_s1",
 266             "creation_date": "2009-09-01",
 267             "cell_line": 1,
 268             "library_species": 8,
 269             "library_type": 2,
 270             "made_by": "Brian Williams",
 271             "affiliations": [
 272                 5
 273             ],
 274             "replicate": 1,
 275             "condition": 1,
 276             "hidden": false,
 277             "stopping_point": "1Aa",
 278             "tags": [],
 279             "made_for": "Brian Williams",
 280             "amplified_from_sample": null,
 281             "notes": "300 bp gel fragment, Amicon filtered\r\nnanodrop: 24.2",
 282             "undiluted_concentration": "2.05",
 283             "successful_pM": null,
 284             "experiment_type": 4,
 285             "antibody": null
 286         }
 287     },
 288   {"pk": 1197, "model": "experiments.lane",
 289    "fields": {
 290        "comment": "stuff",
 291        "library": "11061",
 292        "cluster_estimate": 140000,
 293        "flowcell": 153,
 294        "lane_number": 5,
 295        "pM": "7",
 296        "status": 2
 297        }
 298    },
 299     {
 300         "pk": "11061",
 301         "model": "samples.library",
 302         "fields": {
 303             "ten_nM_dilution": false,
 304             "gel_cut_size": 300,
 305             "library_name": "Paired ends 101 VC_CN_4_M_MBB1185_s2",
 306             "creation_date": "2009-09-01",
 307             "cell_line": 1,
 308             "library_species": 8,
 309             "library_type": 2,
 310             "made_by": "Brian Williams",
 311             "affiliations": [
 312                 2,4
 313             ],
 314             "replicate": 1,
 315             "condition": 1,
 316             "hidden": false,
 317             "stopping_point": "1Aa",
 318             "tags": [],
 319             "made_for": "Brian Williams",
 320             "amplified_from_sample": null,
 321             "notes": "300 bp gel fragment, Amicon filtered\r\nnanodrop: 33.1",
 322             "undiluted_concentration": "12.9",
 323             "successful_pM": null,
 324             "experiment_type": 4,
 325             "antibody": null
 326         }
 327     },
 328   {"pk": 1198, "model": "experiments.lane",
 329    "fields": {
 330        "comment": "This lane's library had the lowest concentration of all the libraries built at the same time (1.2ng/ul)",
 331        "library": "11062",
 332        "cluster_estimate": 2000,
 333        "flowcell": 153,
 334        "lane_number": 6,
 335        "pM": "7",
 336        "status": 0
 337        }
 338    },
 339     {
 340         "pk": "11062",
 341         "model": "samples.library",
 342         "fields": {
 343             "ten_nM_dilution": false,
 344             "gel_cut_size": 300,
 345             "library_name": "Paired ends 102 VC_AU_8_M_MBB4721_s1",
 346             "creation_date": "2009-09-01",
 347             "cell_line": 1,
 348             "library_species": 8,
 349             "library_type": 2,
 350             "made_by": "Brian Williams",
 351             "affiliations": [
 352                 4,5
 353             ],
 354             "replicate": 1,
 355             "condition": 1,
 356             "hidden": false,
 357             "stopping_point": "1Aa",
 358             "tags": [],
 359             "made_for": "Brian Williams",
 360             "amplified_from_sample": null,
 361             "notes": "300 bp gel fragment, Amicon filtered\r\nnanodrop: 13.9",
 362             "undiluted_concentration": "1.2",
 363             "successful_pM": null,
 364             "experiment_type": 4,
 365             "antibody": null
 366         }
 367     },
 368   {"pk": 1199, "model": "experiments.lane",
 369    "fields": {
 370        "comment": "",
 371        "library": "11063",
 372        "cluster_estimate": 120000,
 373        "flowcell": 153,
 374        "lane_number": 7,
 375        "pM": "7"
 376        }
 377    },
 378     {
 379         "pk": "11063",
 380         "model": "samples.library",
 381         "fields": {
 382             "ten_nM_dilution": false,
 383             "gel_cut_size": 300,
 384             "library_name": "Paired ends 103 VC_AU_8_M_MBB4721_s2",
 385             "creation_date": "2009-09-01",
 386             "cell_line": 1,
 387             "library_species": 8,
 388             "library_type": 2,
 389             "made_by": "Brian Williams",
 390             "affiliations": [
 391                 1,3
 392             ],
 393             "replicate": 1,
 394             "condition": 1,
 395             "hidden": false,
 396             "stopping_point": "1Aa",
 397             "tags": [],
 398             "made_for": "Brian Williams",
 399             "amplified_from_sample": null,
 400             "notes": "300 bp gel fragment, Amicon filtered\r\nnanodrop: 46.9",
 401             "undiluted_concentration": "24.5",
 402             "successful_pM": null,
 403             "experiment_type": 4,
 404             "antibody": null
 405         }
 406     },
 407   {"pk": 1200, "model": "experiments.lane",
 408    "fields": {
 409        "comment": "This lane's library had the third lowest concentration of all the libraries built at the same time (5.21ng/ul), but gave perfectly normal cluster numbers",
 410        "library": "11064",
 411        "cluster_estimate": 157000,
 412        "flowcell": 153,
 413        "lane_number": 8,
 414        "pM": "7"
 415        }
 416    },
 417     {
 418         "pk": "11064",
 419         "model": "samples.library",
 420         "fields": {
 421             "ten_nM_dilution": false,
 422             "gel_cut_size": 300,
 423             "library_name": "Paired ends 104 VC_CN_7_M_MBB4898_s1",
 424             "creation_date": "2009-09-01",
 425             "cell_line": 1,
 426             "library_species": 8,
 427             "library_type": 2,
 428             "made_by": "Brian Williams",
 429             "affiliations": [
 430                 3,5
 431             ],
 432             "replicate": 1,
 433             "condition": 1,
 434             "hidden": false,
 435             "stopping_point": "1Aa",
 436             "tags": [],
 437             "made_for": "Brian Williams",
 438             "amplified_from_sample": null,
 439             "notes": "300 bp gel fragment, Amicon filtered\r\nnanodrop: 20.4",
 440             "undiluted_concentration": "5.21",
 441             "successful_pM": null,
 442             "experiment_type": 4,
 443             "antibody": null
 444         }
 445     },
 446    {"pk": 152, "model": "experiments.flowcell",
 447    "fields": {
 448        "paired_end": false,
 449        "run_date": "2009-09-10 18:30:15",
 450        "read_length": 38,
 451        "notes": "328461 4897273 RGT-0248815\r\n328479 4897265 RGT-0249274\r\n330421 4822845 SR-0005496",
 452        "advanced_run": false,
 453        "control_lane": 4,
 454        "cluster_station": 3,
 455        "sequencer": 1,
 456        "flowcell_id": "42JTNAAXX"
 457        }
 458    },
 459   {"pk": 1185, "model": "experiments.lane",
 460    "fields": {
 461        "comment": "",
 462        "library": "11035",
 463        "cluster_estimate": 174000,
 464        "flowcell": 152,
 465        "lane_number": 1,
 466        "pM": "7"
 467        }
 468    },
 469     {
 470         "pk": "11035",
 471         "model": "samples.library",
 472         "fields": {
 473             "ten_nM_dilution": false,
 474             "gel_cut_size": 300,
 475             "library_name": "Paired ends 95 Gilberto_d3_control_LTA",
 476             "creation_date": "2009-08-25",
 477             "cell_line": 1,
 478             "library_species": 9,
 479             "library_type": 2,
 480             "made_by": "Brian Williams",
 481             "affiliations": [
 482                 3
 483             ],
 484             "replicate": 1,
 485             "condition": 1,
 486             "hidden": false,
 487             "stopping_point": "1Aa",
 488             "tags": [],
 489             "made_for": "Brian Williams",
 490             "amplified_from_sample": null,
 491             "notes": "fragment size = 300 bp, Amicon filtered\r\nnanodrop: 67.1",
 492             "undiluted_concentration": "28.5",
 493             "successful_pM": null,
 494             "experiment_type": 4,
 495             "antibody": null
 496         }
 497     },
 498   {"pk": 1186, "model": "experiments.lane",
 499    "fields": {
 500        "comment": "",
 501        "library": "11037",
 502        "cluster_estimate": 173000,
 503        "flowcell": 152,
 504        "lane_number": 2,
 505        "pM": "7"
 506        }
 507    },
 508     {
 509         "pk": "11037",
 510         "model": "samples.library",
 511         "fields": {
 512             "ten_nM_dilution": false,
 513             "gel_cut_size": 300,
 514             "library_name": "Paired ends 97 Kuntz_PDHT",
 515             "creation_date": "2009-08-25",
 516             "cell_line": 1,
 517             "library_species": 3,
 518             "library_type": 2,
 519             "made_by": "Brian Williams",
 520             "affiliations": [
 521                 4
 522             ],
 523             "replicate": 1,
 524             "condition": 1,
 525             "hidden": false,
 526             "stopping_point": "1Aa",
 527             "tags": [],
 528             "made_for": "Brian Williams",
 529             "amplified_from_sample": null,
 530             "notes": "fragment size = 300 bp, Amicon filtered\r\nnanodrop: 52.7",
 531             "undiluted_concentration": "25.5",
 532             "successful_pM": null,
 533             "experiment_type": 4,
 534             "antibody": null
 535         }
 536     },
 537   {"pk": 1187, "model": "experiments.lane",
 538    "fields": {
 539        "comment": "",
 540        "library": "11045",
 541        "cluster_estimate": 198000,
 542        "flowcell": 152,
 543        "lane_number": 3,
 544        "pM": "7"
 545        }
 546    },
 547     {
 548         "pk": "11045",
 549         "model": "samples.library",
 550         "fields": {
 551             "ten_nM_dilution": false,
 552             "gel_cut_size": 250,
 553             "library_name": "FLDN1 8/3/9 anti-AcH3 chip B6 a",
 554             "creation_date": "2009-08-26",
 555             "cell_line": null,
 556             "library_species": 9,
 557             "library_type": 1,
 558             "made_by": "Lorian",
 559             "affiliations": [
 560                 5
 561             ],
 562             "replicate": 1,
 563             "condition": null,
 564             "hidden": false,
 565             "stopping_point": "2A",
 566             "tags": [],
 567             "made_for": "",
 568             "amplified_from_sample": 12044,
 569             "notes": "8/21/2009 11:57:54\tColor: Yellow",
 570             "undiluted_concentration": "20.5",
 571             "successful_pM": null,
 572             "experiment_type": 2,
 573             "antibody": null
 574         }
 575     },
 576   {"pk": 1188, "model": "experiments.lane",
 577    "fields": {
 578        "comment": "",
 579        "library": "11046",
 580        "cluster_estimate": 212000,
 581        "flowcell": 152,
 582        "lane_number": 4,
 583        "pM": "7"}
 584    },
 585     {
 586         "pk": "11046",
 587         "model": "samples.library",
 588         "fields": {
 589             "ten_nM_dilution": false,
 590             "gel_cut_size": 250,
 591             "library_name": "FLDN1 7/8/9 anti-DiMeH3K4 chip B6 a",
 592             "creation_date": "2009-08-26",
 593             "cell_line": null,
 594             "library_species": 9,
 595             "library_type": 1,
 596             "made_by": "Lorian",
 597             "affiliations": [
 598                 6
 599             ],
 600             "replicate": 1,
 601             "condition": null,
 602             "hidden": false,
 603             "stopping_point": "2A",
 604             "tags": [],
 605             "made_for": "",
 606             "amplified_from_sample": 11045,
 607             "notes": "8/21/2009 11:57:54\tColor: Blue",
 608             "undiluted_concentration": "23.9",
 609             "successful_pM": null,
 610             "experiment_type": 2,
 611             "antibody": null
 612         }
 613     },
 614   {"pk": 1189, "model": "experiments.lane",
 615    "fields": {
 616        "comment": "",
 617        "library": "11054",
 618        "cluster_estimate": 49000,
 619        "flowcell": 152,
 620        "lane_number": 5,
 621        "pM": "7"
 622        }
 623    },
 624     {
 625         "pk": "11054",
 626         "model": "samples.library",
 627         "fields": {
 628             "ten_nM_dilution": false,
 629             "gel_cut_size": 225,
 630             "library_name": "HNDHT HLH hnd-1 strain HT115 fed anti-hlh-1 2% fix plate a",
 631             "creation_date": "2009-08-31",
 632             "cell_line": null,
 633             "library_species": 3,
 634             "library_type": 1,
 635             "made_by": "Lorian",
 636             "affiliations": [
 637                 1
 638             ],
 639             "replicate": 1,
 640             "condition": null,
 641             "hidden": false,
 642             "stopping_point": "1Aa",
 643             "tags": [],
 644             "made_for": "",
 645             "amplified_from_sample": 11051,
 646             "notes": "8/26/2009 14:46:56\tColor: Purple",
 647             "undiluted_concentration": "1.47",
 648             "successful_pM": null,
 649             "experiment_type": 2,
 650             "antibody": null
 651         }
 652     },
 653   {"pk": 1190, "model": "experiments.lane",
 654    "fields": {
 655        "comment": "",
 656        "library": "11056",
 657        "cluster_estimate": 48000,
 658        "flowcell": 152,
 659        "lane_number": 6,
 660        "pM": "7"
 661        }
 662    },
 663     {
 664         "pk": "11056",
 665         "model": "samples.library",
 666         "fields": {
 667             "ten_nM_dilution": false,
 668             "gel_cut_size": 225,
 669             "library_name": "HNDM3 HLH hnd-1 strain mex-3 fed anti-hlh-1 2% fix plate a",
 670             "creation_date": "2009-08-31",
 671             "cell_line": null,
 672             "library_species": 3,
 673             "library_type": 1,
 674             "made_by": "Lorian",
 675             "affiliations": [
 676                 2
 677             ],
 678             "replicate": 1,
 679             "condition": null,
 680             "hidden": false,
 681             "stopping_point": "1Aa",
 682             "tags": [],
 683             "made_for": "",
 684             "amplified_from_sample": 11053,
 685             "notes": "8/26/2009 14:46:56\tColor: Black",
 686             "undiluted_concentration": "1.42",
 687             "successful_pM": null,
 688             "experiment_type": 2,
 689             "antibody": null
 690         }
 691     },
 692   {"pk": 1191, "model": "experiments.lane",
 693    "fields": {
 694        "comment": "",
 695        "library": "11057",
 696        "cluster_estimate": 4000,
 697        "flowcell": 152,
 698        "lane_number": 7,
 699        "pM": "7"
 700        }
 701    },
 702     {
 703         "pk": "11057",
 704         "model": "samples.library",
 705         "fields": {
 706             "ten_nM_dilution": false,
 707             "gel_cut_size": 225,
 708             "library_name": "HNDM3 4H8 hnd-1 strain mex-3 fed 4H8 2% fix plate a",
 709             "creation_date": "2009-08-31",
 710             "cell_line": null,
 711             "library_species": 3,
 712             "library_type": 1,
 713             "made_by": "Lorian",
 714             "affiliations": [
 715                 3
 716             ],
 717             "replicate": 1,
 718             "condition": null,
 719             "hidden": false,
 720             "stopping_point": "1Aa",
 721             "tags": [],
 722             "made_for": "",
 723             "amplified_from_sample": 11054,
 724             "notes": "8/26/2009 14:46:56\tColor: Orange.",
 725             "undiluted_concentration": "1.3",
 726             "successful_pM": null,
 727             "experiment_type": 2,
 728             "antibody": null
 729         }
 730     },
 731   {"pk": 1192, "model": "experiments.lane",
 732    "fields": {
 733        "comment": "",
 734        "library": "11065",
 735        "cluster_estimate": 5000,
 736        "flowcell": 152,
 737        "lane_number": 8,
 738        "pM": "7"
 739        }
 740    },
 741     {
 742         "pk": "11065",
 743         "model": "samples.library",
 744         "fields": {
 745             "ten_nM_dilution": false,
 746             "gel_cut_size": 300,
 747             "library_name": "Paired ends 105 Kuntz PDM3",
 748             "creation_date": "2009-09-01",
 749             "cell_line": 1,
 750             "library_species": 3,
 751             "library_type": 2,
 752             "made_by": "Brian Williams",
 753             "affiliations": [
 754                 4
 755             ],
 756             "replicate": 1,
 757             "condition": 1,
 758             "hidden": false,
 759             "stopping_point": "1Aa",
 760             "tags": [],
 761             "made_for": "Brian Williams",
 762             "amplified_from_sample": null,
 763             "notes": "300 bp gel fragment, Amicon filtered\r\nnanodrop: 30.5",
 764             "undiluted_concentration": "2.47",
 765             "successful_pM": null,
 766             "experiment_type": 4,
 767             "antibody": null
 768         }
 769     },
 770   {"pk": 151, "model": "experiments.flowcell",
 771    "fields": {
 772        "paired_end": false,
 773        "run_date": "2009-09-08 15:39:28",
 774        "read_length": 38,
 775        "notes": "Rebuild of broken flowcell\r\n\r\n328461 4820241 RGT-0215719\r\n328479 4897265 RGT-0249510\r\n330421 4822845 SR-0005402\r\n",
 776        "advanced_run": false,
 777        "control_lane": 5,
 778        "cluster_station": 3,
 779        "sequencer": 2,
 780        "flowcell_id": "42JU1AAXX"
 781        }
 782    },
 783   {"pk": 1177, "model": "experiments.lane",
 784    "fields": {
 785        "comment": "",
 786        "library": "11034",
 787        "cluster_estimate": 177000,
 788        "flowcell": 151,
 789        "lane_number": 1,
 790        "pM": "7"
 791        }
 792    },
 793   {"pk": 1178, "model": "experiments.lane",
 794    "fields": {
 795        "comment": "",
 796        "library": "11036",
 797        "cluster_estimate": 169000,
 798        "flowcell": 151,
 799        "lane_number": 2,
 800        "pM": "7"
 801        }
 802    },
 803     {
 804         "pk": "11036",
 805         "model": "samples.library",
 806         "fields": {
 807             "ten_nM_dilution": false,
 808             "gel_cut_size": 300,
 809             "library_name": "Paired ends 96 Kuntz_PDE1",
 810             "creation_date": "2009-08-25",
 811             "cell_line": 1,
 812             "library_species": 3,
 813             "library_type": 2,
 814             "made_by": "Brian Williams",
 815             "affiliations": [
 816                 5
 817             ],
 818             "replicate": 1,
 819             "condition": 1,
 820             "hidden": false,
 821             "stopping_point": "1Aa",
 822             "tags": [],
 823             "made_for": "Brian Williams",
 824             "amplified_from_sample": null,
 825             "notes": "fragment size = 300 bp",
 826             "undiluted_concentration": "30.6",
 827             "successful_pM": null,
 828             "experiment_type": 4,
 829             "antibody": null
 830         }
 831     },
 832     {
 833         "pk": "11034",
 834         "model": "samples.library",
 835         "fields": {
 836             "ten_nM_dilution": false,
 837             "gel_cut_size": 300,
 838             "library_name": "Paired ends 94 Gilberto_d3_denerv_LTA",
 839             "creation_date": "2009-08-25",
 840             "cell_line": 1,
 841             "library_species": 9,
 842             "library_type": 2,
 843             "made_by": "Brian Williams",
 844             "affiliations": [
 845                 1
 846             ],
 847             "replicate": 1,
 848             "condition": 1,
 849             "hidden": false,
 850             "stopping_point": "1Aa",
 851             "tags": [],
 852             "made_for": "Brian Williams",
 853             "amplified_from_sample": null,
 854             "notes": "fragment size = 300 bp",
 855             "undiluted_concentration": "27",
 856             "successful_pM": null,
 857             "experiment_type": 4,
 858             "antibody": null
 859         }
 860     },
 861     {
 862         "pk": "12044",
 863         "model": "samples.library",
 864         "fields": {
 865             "ten_nM_dilution": false,
 866             "gel_cut_size": 225,
 867             "library_name": "Pooled Indexed Test",
 868             "creation_date": "2009-08-26",
 869             "cell_line": null,
 870             "library_species": 9,
 871             "library_type": 5,
 872             "multiplex_id": "1,2,3",
 873             "made_by": "Lorian",
 874             "affiliations": [
 875                 2
 876             ],
 877             "replicate": 1,
 878             "condition": null,
 879             "hidden": false,
 880             "stopping_point": "2A",
 881             "tags": [],
 882             "made_for": "",
 883             "amplified_from_sample": 11043,
 884             "notes": "8/21/2009 11:57:54\tColor: Orange",
 885             "undiluted_concentration": "22.4",
 886             "successful_pM": null,
 887             "experiment_type": 2,
 888             "antibody": null
 889         }
 890     },
 891     {
 892         "pk": "13044",
 893         "model": "samples.library",
 894         "fields": {
 895             "ten_nM_dilution": false,
 896             "gel_cut_size": 225,
 897             "library_name": "Dual Indexed Test",
 898             "creation_date": "2009-08-26",
 899             "cell_line": null,
 900             "library_species": 9,
 901             "library_type": 9,
 902             "multiplex_id": "N701-N501",
 903             "made_by": "Lorian",
 904             "affiliations": [
 905                 2
 906             ],
 907             "replicate": 1,
 908             "condition": null,
 909             "hidden": false,
 910             "stopping_point": "2A",
 911             "tags": [],
 912             "made_for": "",
 913             "amplified_from_sample": 11043,
 914             "notes": "8/21/2009 11:57:54\tColor: Orange",
 915             "undiluted_concentration": "22.4",
 916             "successful_pM": null,
 917             "experiment_type": 2,
 918             "antibody": null
 919         }
 920     },
 921     {
 922         "pk": "11045",
 923         "model": "samples.library",
 924         "fields": {
 925             "ten_nM_dilution": false,
 926             "gel_cut_size": 225,
 927             "library_name": "Simple Indexed Test",
 928             "creation_date": "2009-08-26",
 929             "cell_line": null,
 930             "library_species": 9,
 931             "library_type": 5,
 932             "multiplex_id": "1",
 933             "made_by": "Lorian",
 934             "affiliations": [
 935                 2
 936             ],
 937             "replicate": 2,
 938             "condition": null,
 939             "hidden": false,
 940             "stopping_point": "2A",
 941             "tags": [],
 942             "made_for": "",
 943             "amplified_from_sample": 11043,
 944             "notes": "8/21/2009 11:57:54\tColor: Orange",
 945             "undiluted_concentration": "22.4",
 946             "successful_pM": null,
 947             "experiment_type": 2,
 948             "antibody": null
 949         }
 950     },
 951   {"pk": 1179,
 952    "model": "experiments.lane",
 953    "fields": {
 954        "comment": "",
 955        "library": "12044",
 956        "cluster_estimate": 196000,
 957        "flowcell": 151,
 958        "lane_number": 3,
 959        "pM": "7"
 960        }
 961    },
 962   {"pk": 1279,
 963    "model": "experiments.lane",
 964    "fields": {
 965        "comment": "",
 966        "library": "11045",
 967        "cluster_estimate": 196000,
 968        "flowcell": 151,
 969        "lane_number": 3,
 970        "pM": "7"
 971        }
 972    },
 973   {"pk": 1379,
 974    "model": "experiments.lane",
 975    "fields": {
 976        "comment": "",
 977        "library": "13044",
 978        "cluster_estimate": 196000,
 979        "flowcell": 151,
 980        "lane_number": 4,
 981        "pM": "7"
 982        }
 983    },
 984
 985     {
 986         "pk": "11044",
 987         "model": "samples.library",
 988         "fields": {
 989             "ten_nM_dilution": false,
 990             "gel_cut_size": 225,
 991             "library_name": "p300 60h C2 FA KF 12/22/8 a",
 992             "creation_date": "2009-08-26",
 993             "cell_line": null,
 994             "library_species": 9,
 995             "library_type": 1,
 996             "made_by": "Lorian",
 997             "affiliations": [
 998                 3
 999             ],
1000             "replicate": 1,
1001             "condition": null,
1002             "hidden": false,
1003             "stopping_point": "2A",
1004             "tags": [],
1005             "made_for": "",
1006             "amplified_from_sample": 11043,
1007             "notes": "8/21/2009 11:57:54\tColor: Orange.",
1008             "undiluted_concentration": "22.4",
1009             "successful_pM": null,
1010             "experiment_type": 2,
1011             "antibody": null
1012         }
1013     },
1014   {"pk": 1180, "model": "experiments.lane",
1015    "fields": {
1016        "comment": "",
1017        "library": "11047",
1018        "cluster_estimate": 200000,
1019        "flowcell": 151,
1020        "lane_number": 4,
1021        "pM": "7"
1022        }
1023    },
1024     {
1025         "pk": "11047",
1026         "model": "samples.library",
1027         "fields": {
1028             "ten_nM_dilution": false,
1029             "gel_cut_size": 250,
1030             "library_name": "FLDN1 7/8/9 anti-TriMeH3K27 chip B6 a",
1031             "creation_date": "2009-08-26",
1032             "cell_line": null,
1033             "library_species": 9,
1034             "library_type": 1,
1035             "made_by": "Lorian",
1036             "affiliations": [
1037                 4
1038             ],
1039             "replicate": 1,
1040             "condition": null,
1041             "hidden": false,
1042             "stopping_point": "2A",
1043             "tags": [],
1044             "made_for": "",
1045             "amplified_from_sample": 11046,
1046             "notes": "8/21/2009 11:57:54\tColor: Green",
1047             "undiluted_concentration": "24.9",
1048             "successful_pM": null,
1049             "experiment_type": 2,
1050             "antibody": null
1051         }
1052     },
1053   {"pk": 1181, "model": "experiments.lane",
1054    "fields": {
1055        "comment": "",
1056        "library": "11055",
1057        "cluster_estimate": 104000,
1058        "flowcell": 151,
1059        "lane_number": 5,
1060        "pM": "7"
1061        }
1062    },
1063     {
1064         "pk": "11055",
1065         "model": "samples.library",
1066         "fields": {
1067             "ten_nM_dilution": false,
1068             "gel_cut_size": 225,
1069             "library_name": "HNDHT 4H8 hnd-1 strain HT115 fed 4H8 2% fix plate a",
1070             "creation_date": "2009-08-31",
1071             "cell_line": null,
1072             "library_species": 3,
1073             "library_type": 1,
1074             "made_by": "Lorian",
1075             "affiliations": [
1076                 5
1077             ],
1078             "replicate": 1,
1079             "condition": null,
1080             "hidden": false,
1081             "stopping_point": "1Aa",
1082             "tags": [],
1083             "made_for": "",
1084             "amplified_from_sample": 11052,
1085             "notes": "8/26/2009 14:46:56\tColor: White.",
1086             "undiluted_concentration": "2.17",
1087             "successful_pM": null,
1088             "experiment_type": 2,
1089             "antibody": null
1090         }
1091     },
1092   {"pk": 1182, "model": "experiments.lane",
1093    "fields": {
1094        "comment": "",
1095        "library": "11067",
1096        "cluster_estimate": 168000,
1097        "flowcell": 151,
1098        "lane_number": 6,
1099        "pM": "7"
1100        }
1101    },
1102     {
1103         "pk": "11067",
1104         "model": "samples.library",
1105         "fields": {
1106             "ten_nM_dilution": false,
1107             "gel_cut_size": 325,
1108             "library_name": "Paired End SP-BAC Barcoding test 250-300 bp",
1109             "creation_date": "2009-09-03",
1110             "cell_line": 1,
1111             "library_species": 10,
1112             "library_type": 2,
1113             "made_by": "Igor",
1114             "affiliations": [
1115                 1
1116             ],
1117             "replicate": 1,
1118             "condition": 1,
1119             "hidden": false,
1120             "stopping_point": "Done",
1121             "tags": [],
1122             "made_for": "Andy Cameron",
1123             "amplified_from_sample": null,
1124             "notes": "12 SP BACs",
1125             "undiluted_concentration": "1.45",
1126             "successful_pM": null,
1127             "experiment_type": 8,
1128             "antibody": null
1129         }
1130     },
1131   {"pk": 1183, "model": "experiments.lane",
1132    "fields": {
1133        "comment": "",
1134        "library": "11069",
1135        "cluster_estimate": 184000,
1136        "flowcell": 151,
1137        "lane_number": 7,
1138        "pM": "7"
1139        }
1140    },
1141     {
1142         "pk": "11069",
1143         "model": "samples.library",
1144         "fields": {
1145             "ten_nM_dilution": false,
1146             "gel_cut_size": 300,
1147             "library_name": "Paired End AG-3d-1 AG domain of floral meristem day 3, rep 1",
1148             "creation_date": "2009-09-02",
1149             "cell_line": null,
1150             "library_species": 6,
1151             "library_type": 2,
1152             "made_by": "Yuling Jiao",
1153             "affiliations": [
1154                 2
1155             ],
1156             "replicate": 1,
1157             "condition": null,
1158             "hidden": false,
1159             "stopping_point": "Done",
1160             "tags": [],
1161             "made_for": "",
1162             "amplified_from_sample": null,
1163             "notes": "nanodrop: Xng/ul.",
1164             "undiluted_concentration": "18.3",
1165             "successful_pM": null,
1166             "experiment_type": 4,
1167             "antibody": null
1168         }
1169     },
1170   {"pk": 1184, "model": "experiments.lane",
1171    "fields": {
1172        "comment": "",
1173        "library": "11070",
1174        "cluster_estimate": 182000,
1175        "flowcell": 151,
1176        "lane_number": 8,
1177        "pM": "7"
1178        }
1179    },
1180     {
1181         "pk": "11070",
1182         "model": "samples.library",
1183         "fields": {
1184             "ten_nM_dilution": false,
1185             "gel_cut_size": 300,
1186             "library_name": "Paired End AG-5d-1 AG domain of floral meristem day 5, rep 1",
1187             "creation_date": "2009-09-02",
1188             "cell_line": null,
1189             "library_species": 6,
1190             "library_type": 2,
1191             "made_by": "Yuling Jiao",
1192             "affiliations": [
1193                 3
1194             ],
1195             "replicate": 1,
1196             "condition": null,
1197             "hidden": false,
1198             "stopping_point": "Done",
1199             "tags": [],
1200             "made_for": "",
1201             "amplified_from_sample": null,
1202             "notes": "nanodrop: 40ng/ul\r\nCalibrated qbit with standards.\r\nMeasured 2ul library with qbit using HS kit.\r\n",
1203             "undiluted_concentration": "20.3",
1204             "successful_pM": null,
1205             "experiment_type": 4,
1206             "antibody": null
1207         }
1208      },
1209  {"pk": 200, "model": "experiments.flowcell",
1210   "fields": {
1211       "paired_end": true,
1212       "run_date": "2007-09-27 22:12:13",
1213       "read_length": 36,
1214       "notes": "",
1215       "advanced_run": false,
1216       "control_lane": 2,
1217       "cluster_station": 3,
1218       "sequencer": 2,
1219       "flowcell_id": "30012AAXX (failed)"
1220       }
1221   },
1222   {"pk": 201, "model": "experiments.lane",
1223    "fields": {
1224        "comment": "",
1225        "library": "11070",
1226        "cluster_estimate": 182000,
1227        "flowcell": 200,
1228        "lane_number": 8,
1229        "pM": "7"
1230        }
1231    }
1232 ]