1 # Create your views here.
2 #from django.template import Context, loader
3 #shortcut to the above modules
4 from django.shortcuts import render_to_response, get_object_or_404
5 #from htswfrontend.fctracker.models import *
6 from htsworkflow.frontend.experiments.models import *
7 from django.http import HttpResponse
8 from django.core.exceptions import ObjectDoesNotExist
11 all_runs = DataRun.objects.all().order_by('-run_start_time')
12 #t = loader.get_template('exptrack/index.html')
14 # 'data_run_list': all_runs,
16 #return HttpResponse(t.render(c))
17 # shortcut to the above module usage
18 return render_to_response('exptrack/index.html',{'data_run_list': all_runs})
20 def detail(request, run_folder):
21 html_str = '<h2>Exp Track Details Page</h2>'
22 html_str += 'Run Folder: '+run_folder
23 r = get_object_or_404(DataRun,run_folder=run_folder)
24 return render_to_response('exptrack/detail.html',{'run_f': r})
26 def makeFCSheet(request,fcid):
27 # get Flowcell by input fcid
31 rec = FlowCell.objects.get(flowcell_id=fcid)
32 except ObjectDoesNotExist:
34 lanes = ['1','2','3','4','5','6','7','8']
35 return render_to_response('exptrack/flowcellSheet.html',{'fc': rec})
37 def test_Libs(request):
39 str += '<table border=1><tr><th>Lib ID</th><th>Current Libaray Name (Free Text)</th><th>Auto-composed Libaray Name (antibody + celline + libid + species + [replicate])</th></tr>'
40 allLibs = Library.objects.all()
41 #allLibs = Library.objects.filter(antibody__isnull=False)
44 str += '<td>'+L.library_id+'</td><td>'+L.library_name+'</td>'
46 str += L.experiment_type+'_'
47 if L.cell_line.cellline_name != 'Unknown':
48 str += L.cell_line.cellline_name+'_'
51 if L.antibody is not None:
52 str += L.antibody.nickname + '_'
53 except Antibody.DoesNotExist:
56 str += 'Rep'+L.replicate.__str__()
60 return HttpResponse(str)