1 from django.contrib import admin
2 from django.contrib.admin import widgets
3 from django.contrib.admin.models import User
4 from django.contrib.auth.admin import UserAdmin
5 from django.contrib.auth.forms import UserCreationForm, UserChangeForm
6 from django.db import models
7 from django.utils.translation import ugettext_lazy as _
9 from htsworkflow.frontend.samples.models import Antibody, Cellline, Condition, ExperimentType, HTSUser, LibraryType, Species, Affiliation, Library, Tag
10 from htsworkflow.frontend.experiments.models import Lane
12 class AffiliationOptions(admin.ModelAdmin):
13 list_display = ('name','contact','email')
16 'fields': (('name','contact','email','users'))
20 # some post 1.0.2 version of django has formfield_overrides
21 # which would replace this code with:
22 # formfield_overrids = {
23 # models.ManyToMany: { 'widget': widgets.FilteredSelectMultiple }
25 def formfield_for_dbfield(self, db_field, **kwargs):
26 if db_field.name == 'users':
27 kwargs['widget'] = widgets.FilteredSelectMultiple(db_field.verbose_name, (db_field.name in self.filter_vertical))
28 rv = super(AffiliationOptions, self).formfield_for_dbfield(db_field, **kwargs)
29 # print db_field.name, kwargs
32 class AntibodyOptions(admin.ModelAdmin):
33 search_fields = ('antigene','nickname','catalog','antibodies','source','biology','notes')
34 list_display = ('antigene','nickname','antibodies','catalog','source','biology','notes')
35 list_filter = ('antibodies','source')
38 'fields': (('antigene','nickname','antibodies'),('catalog','source'),('biology'),('notes'))
42 class CelllineOptions(admin.ModelAdmin):
43 list_display = ('cellline_name', 'nickname', 'notes')
44 search_fields = ('cellline_name', 'nickname', 'notes')
47 'fields': (('cellline_name'),('notes'),)
51 class ConditionOptions(admin.ModelAdmin):
52 list_display = (('condition_name'), ('notes'),)
55 'fields': (('condition_name'),('nickname'),('notes'),)
59 class ExperimentTypeOptions(admin.ModelAdmin):
60 model = ExperimentType
61 #list_display = ('name',)
62 #fieldsets = ( (None, { 'fields': ('name',) }), )
64 class HTSUserCreationForm(UserCreationForm):
67 fields = ("username",'first_name','last_name')
69 class HTSUserChangeForm(UserChangeForm):
73 class HTSUserOptions(UserAdmin):
74 form = HTSUserChangeForm
75 add_form = HTSUserCreationForm
77 class LaneLibraryInline(admin.StackedInline):
81 class Library_Inline(admin.TabularInline):
84 class LibraryTypeOptions(admin.ModelAdmin):
87 class LibraryOptions(admin.ModelAdmin):
90 "all": ("css/wide_account_number.css",)
93 date_hierarchy = "creation_date"
99 'cell_line__cellline_name',
100 'library_species__scientific_name',
101 'library_species__common_name',
117 'undiluted_concentration',
135 list_display_links = ('id', 'library_name',)
139 ('id','library_name','hidden'),
141 ('library_type', 'experiment_type', 'replicate'),
142 ('cell_line','condition','antibody'),)
144 ('Creation Information:', {
145 'fields' : (('made_for', 'made_by', 'creation_date'), ('stopping_point', 'amplified_from_sample'), ('avg_lib_size','undiluted_concentration', 'ten_nM_dilution', 'successful_pM'), 'account_number', 'notes',)
147 ('Library/Project Affiliation:', {
148 'fields' : (('affiliations'), ('tags'),)
155 # some post 1.0.2 version of django has formfield_overrides
156 # which would replace this code with:
157 # formfield_overrids = {
158 # models.ManyToMany: { 'widget': widgets.FilteredSelectMultiple }
160 def formfield_for_dbfield(self, db_field, **kwargs):
161 if db_field.name in ('affiliations', 'tags'):
162 kwargs['widget'] = widgets.FilteredSelectMultiple(db_field.verbose_name,
163 (db_field.name in self.filter_vertical))
164 rv = super(LibraryOptions, self).formfield_for_dbfield(db_field, **kwargs)
167 class SpeciesOptions(admin.ModelAdmin):
170 'fields': (('scientific_name', 'common_name'),)
174 class TagOptions(admin.ModelAdmin):
175 list_display = ('tag_name', 'context')
178 'fields': ('tag_name', 'context')
182 admin.site.register(Affiliation, AffiliationOptions)
183 admin.site.register(Antibody, AntibodyOptions)
184 admin.site.register(Cellline, CelllineOptions)
185 admin.site.register(Condition, ConditionOptions)
186 admin.site.register(ExperimentType, ExperimentTypeOptions)
187 admin.site.register(HTSUser, HTSUserOptions)
188 admin.site.register(LibraryType, LibraryTypeOptions)
189 admin.site.register(Library, LibraryOptions)
190 admin.site.register(Species, SpeciesOptions)
191 admin.site.register(Tag, TagOptions)