1 from django.contrib import admin
2 from django.contrib.admin import widgets
3 from django.db import models
4 from django.utils.translation import ugettext_lazy as _
6 from htsworkflow.frontend.samples.models import Antibody, Cellline, Condition, ExperimentType, LibraryType, Species, Affiliation, Library, Tag
8 class Library_Inline(admin.TabularInline):
11 class CelllineOptions(admin.ModelAdmin):
12 list_display = ('cellline_name', 'nickname', 'notes')
13 search_fields = ('cellline_name', 'nickname', 'notes')
16 'fields': (('cellline_name'),('notes'),)
20 class ExperimentTypeOptions(admin.ModelAdmin):
21 model = ExperimentType
22 #list_display = ('name',)
23 #fieldsets = ( (None, { 'fields': ('name',) }), )
25 class LibraryTypeOptions(admin.ModelAdmin):
28 class LibraryOptions(admin.ModelAdmin):
29 date_hierarchy = "creation_date"
35 'cell_line__cellline_name',
36 'library_species__scientific_name',
37 'library_species__common_name',
53 'undiluted_concentration',
71 list_display_links = ('library_id', 'library_name',)
75 ('library_id','library_name','hidden'),
77 ('library_type', 'experiment_type', 'replicate'),
78 ('cell_line','condition','antibody'),)
80 ('Creation Information:', {
81 'fields' : (('made_for', 'made_by', 'creation_date'), ('stopping_point', 'amplified_from_sample'), ('avg_lib_size','undiluted_concentration', 'ten_nM_dilution', 'successful_pM'), 'notes',)
83 ('Library/Project Affiliation:', {
84 'fields' : (('affiliations'), ('tags'),)
88 # some post 1.0.2 version of django has formfield_overrides
89 # which would replace this code with:
90 # formfield_overrids = {
91 # models.ManyToMany: { 'widget': widgets.FilteredSelectMultiple }
93 def formfield_for_dbfield(self, db_field, **kwargs):
94 if db_field.name == 'affiliations':
95 kwargs['widget'] = widgets.FilteredSelectMultiple(db_field.verbose_name, (db_field.name in self.filter_vertical))
96 rv = super(LibraryOptions, self).formfield_for_dbfield(db_field, **kwargs)
97 print db_field.name, kwargs
100 class AffiliationOptions(admin.ModelAdmin):
101 list_display = ('name','contact','email')
104 'fields': (('name','contact','email'))
108 # class UserOptions(admin.ModelAdmin):
109 # inlines = [Library_Inline]
111 class AntibodyOptions(admin.ModelAdmin):
112 search_fields = ('antigene','nickname','catalog','antibodies','source','biology','notes')
113 list_display = ('antigene','nickname','antibodies','catalog','source','biology','notes')
114 list_filter = ('antibodies','source')
117 'fields': (('antigene','nickname','antibodies'),('catalog','source'),('biology'),('notes'))
121 class SpeciesOptions(admin.ModelAdmin):
124 'fields': (('scientific_name', 'common_name'),)
128 class ConditionOptions(admin.ModelAdmin):
129 list_display = (('condition_name'), ('notes'),)
132 'fields': (('condition_name'),('nickname'),('notes'),)
136 class TagOptions(admin.ModelAdmin):
137 list_display = ('tag_name', 'context')
140 'fields': ('tag_name', 'context')
144 admin.site.register(Affiliation, AffiliationOptions)
145 admin.site.register(Antibody, AntibodyOptions)
146 admin.site.register(Cellline, CelllineOptions)
147 admin.site.register(Condition, ConditionOptions)
148 admin.site.register(ExperimentType, ExperimentTypeOptions)
149 admin.site.register(LibraryType, LibraryTypeOptions)
150 admin.site.register(Library, LibraryOptions)
151 admin.site.register(Species, SpeciesOptions)
152 admin.site.register(Tag, TagOptions)