2 Generate settings for the Django Application.
4 To make it easier to customize the application the settings can be
5 defined in a configuration file read by ConfigParser.
7 The options understood by this module are (with their defaults):
12 database_engine=sqlite3
13 database_name=/path/to/db
22 [allowed_analysis_hosts]
31 __docformat__ = "restructuredtext en"
33 def options_to_list(dest, section_name):
35 Load a options from section_name and store in a dictionary
37 if options.has_section(section_name):
38 for name in options.options(section_name):
39 dest.append( options.get(section_name, name) )
41 def options_to_dict(dest, section_name):
43 Load a options from section_name and store in a dictionary
45 if options.has_section(section_name):
46 for name in options.options(section_name):
47 dest[name] = options.get(section_name, name)
49 # define your defaults here
50 options = ConfigParser.SafeConfigParser(
51 { 'email_host': 'localhost',
53 'database_engine': 'sqlite3',
55 os.path.abspath('/htsworkflow/htswfrontend/dev_fctracker.db'),
56 'time_zone': 'America/Los_Angeles',
58 'link_flowcell_storage_device_url': "http://localhost:8000/inventory/lts/link/"
61 options.read([os.path.expanduser("~/.htsworkflow.ini"),
62 '/etc/htsworkflow.ini',])
64 # Django settings for elandifier project.
67 TEMPLATE_DEBUG = DEBUG
70 options_to_list(ADMINS, 'admins')
74 EMAIL_HOST = options.get('frontend', 'email_host')
75 EMAIL_PORT = int(options.get('frontend', 'email_port'))
77 # 'postgresql_psycopg2', 'postgresql', 'mysql', 'sqlite3' or 'ado_mssql'.
78 DATABASE_ENGINE = options.get('frontend', 'database_engine')
80 # Or path to database file if using sqlite3.
81 DATABASE_NAME = options.get('frontend', 'database_name' )
82 DATABASE_USER = '' # Not used with sqlite3.
83 DATABASE_PASSWORD = '' # Not used with sqlite3.
84 DATABASE_HOST = '' # Set to empty string for localhost. Not used with sqlite3.
85 DATABASE_PORT = '' # Set to empty string for default. Not used with sqlite3.
87 # Local time zone for this installation. Choices can be found here:
88 # http://www.postgresql.org/docs/8.1/static/datetime-keywords.html#DATETIME-TIMEZONE-SET-TABLE
89 # although not all variations may be possible on all operating systems.
90 # If running in a Windows environment this must be set to the same as your
92 TIME_ZONE = options.get('frontend', 'time_zone')
94 # Language code for this installation. All choices can be found here:
95 # http://www.w3.org/TR/REC-html40/struct/dirlang.html#langcodes
96 # http://blogs.law.harvard.edu/tech/stories/storyReader$15
97 LANGUAGE_CODE = 'en-us'
101 # If you set this to False, Django will make some optimizations so as not
102 # to load the internationalization machinery.
105 # Absolute path to the directory that holds media.
106 # Example: "/home/media/media.lawrence.com/"
107 MEDIA_ROOT = os.path.abspath(os.path.split(__file__)[0]) + '/static/'
109 # URL that handles the media served from MEDIA_ROOT.
110 # Example: "http://media.lawrence.com"
111 MEDIA_URL = '/static/'
113 # URL prefix for admin media -- CSS, JavaScript and images. Make sure to use a
115 # Examples: "http://foo.com/media/", "/media/".
116 ADMIN_MEDIA_PREFIX = '/media/'
118 # Make this unique, and don't share it with anybody.
119 SECRET_KEY = '(ekv^=gf(j9f(x25@a7r+8)hqlz%&_1!tw^75l%^041#vi=@4n'
121 # List of callables that know how to import templates from various sources.
123 'django.template.loaders.filesystem.load_template_source',
124 'django.template.loaders.app_directories.load_template_source',
125 # 'django.template.loaders.eggs.load_template_source',
128 MIDDLEWARE_CLASSES = (
129 'django.middleware.common.CommonMiddleware',
130 'django.contrib.sessions.middleware.SessionMiddleware',
131 'django.contrib.auth.middleware.AuthenticationMiddleware',
132 'django.middleware.doc.XViewMiddleware',
135 ROOT_URLCONF = 'htsworkflow.frontend.urls'
138 # Put strings here, like "/home/html/django_templates" or "C:/www/django/templates".
139 # Always use forward slashes, even on Windows.
140 # Don't forget to use absolute paths, not relative paths.
141 os.path.join(os.path.split(__file__)[0], 'templates'),
145 'django.contrib.admin',
146 'django.contrib.auth',
147 'django.contrib.contenttypes',
148 'django.contrib.humanize',
149 'django.contrib.sessions',
150 'django.contrib.sites',
151 'htsworkflow.frontend.eland_config',
152 'htsworkflow.frontend.samples',
153 # modules from htsworkflow branch
154 'htsworkflow.frontend.experiments',
155 'htsworkflow.frontend.analysis',
156 'htsworkflow.frontend.reports',
157 'htsworkflow.frontend.inventory',
158 'django.contrib.databrowse',
161 # Project specific settings
163 ALLOWED_IPS={'127.0.0.1': '127.0.0.1'}
164 options_to_dict(ALLOWED_IPS, 'allowed_hosts')
166 ALLOWED_ANALYS_IPS = {'127.0.0.1': '127.0.0.1'}
167 options_to_dict(ALLOWED_ANALYS_IPS, 'allowed_analysis_hosts')
168 #UPLOADTO_HOME = os.path.abspath('../../uploads')
169 #UPLOADTO_CONFIG_FILE = os.path.join(UPLOADTO_HOME, 'eland_config')
170 #UPLOADTO_ELAND_RESULT_PACKS = os.path.join(UPLOADTO_HOME, 'eland_results')
171 #UPLOADTO_BED_PACKS = os.path.join(UPLOADTO_HOME, 'bed_packs')
172 RESULT_HOME_DIR='/Users/diane/proj/solexa/results/flowcells'
174 LINK_FLOWCELL_STORAGE_DEVICE_URL = options.get('frontend', 'link_flowcell_storage_device_url')