1 {% extends "base_site.html" %}
2 {% load humanize i18n %}
5 <link type="text/css" rel="stylesheet" href="/static/css/app.css" />
6 <script type="text/javascript" src="/static/js/jquery.min.js"></script>
8 {% block additional_javascript %}
14 {% include "experiments/flowcell_header.html" %}
15 <div class="htswdetail" typeof="libns:IlluminaFlowcell" resource="{{flowcell.get_absolute_url}}">
28 {% for lane in lanes %}
30 <td rel="libns:has_lane">
31 <a href="{{lane.get_absolute_url}}" typeof="libns:IlluminaLane">
32 <span property="libns:lane_number">{{lane.lane_number}}</span>
35 <td rel="libns:library"
36 about="{{lane.get_absolute_url}}"
37 resource="{{lane.library.get_absolute_url}}">
38 <a typeof="libns:Library" href="{{lane.library.get_absolute_url}}">
39 <span property="libns:library_id"
40 >{{lane.library.id}}</span></a>
41 {% if user.is_staff %}
42 <a href="{{lane.library.get_admin_url}}">
43 <img class="icon_button"
44 src="/media/img/admin/icon_changelink.gif"/>
48 <a href="{{lane.library.get_absolute_url}}">
49 <span property="libns:name"
50 about="{{lane.library.get_absolute_url}}"
51 >{{lane.library.library_name}}</span>
54 <td about="{{lane.library.get_absolute_url}}" rel="libns:species">
55 <a href="{{lane.library.library_species.get_absolute_url}}"
56 typeof="libns:Species">
57 <span property="libns:species_name">{{ lane.library.library_species.scientific_name }}</span></a>
59 <td about="{{lane.get_absolute_url}}">
60 <span property="libns:comment">{{lane.comment}}</span>
66 <div class="htsw_flowcell_ivc">
67 {% for run in flowcell.datarun_set.all %}
68 <h2>Run {{ run.runfolder_name }}</h2>
69 {% if run.lane_files %}
76 <td>IVC Percent Base</td>
77 <td>IVC Percent Base All</td>
78 <td>IVC Percent Base Called</td>
82 {% for lane_id, lane_file_set in run.lane_files.items %}
83 {% if lane_file_set.ivc_all %}
85 <td>{{ lane_id }}</td>
87 <a href="{{ lane_file_set.ivc_all.get_absolute_url }}">
88 <img height="84" width="126" alt="Lane {{lane_id }} IVC All"
89 src="{{ lane_file_set.ivc_all.get_absolute_url }}"/></a>
92 <a href="{{ lane_file_set.ivc_call.get_absolute_url }}">
93 <img height="84" width="126" alt="Lane {{lane_id }} IVC Call"
94 src="{{ lane_file_set.ivc_call.get_absolute_url }}"/>
98 <a href="{{ lane_file_set.ivc_percent_base.get_absolute_url }}">
99 <img height="84" width="126" alt="Lane {{lane_id }} IVC % Base"
100 src="{{ lane_file_set.ivc_percent_base.get_absolute_url }}"/>
104 <a href="{{ lane_file_set.ivc_percent_all.get_absolute_url }}">
105 <img height="84" width="126" alt="Lane {{lane_id }} IVC % Base All"
106 src="{{ lane_file_set.ivc_percent_all.get_absolute_url }}"/>
110 <a href="{{ lane_file_set.ivc_percent_call.get_absolute_url }}">
111 <img height="84" width="126"
112 alt="Lane {{lane_id }} IVC % Base Called"
113 src="{{ lane_file_set.ivc_percent_call.get_absolute_url }}"/>
126 <!-- end flowcell_detail -->