htsworkflow/frontend/templates/experiments/flowcell_header.html

   1   <div class="flowcell_identity">
   2   <h2>About this Flowcell</h2>
   3   <b>Flowcell</b>:
   4     <a href="{{flowcell.get_absolute_url}}" property="libns:flowcell_id">{{flowcell.flowcell_id}}</a>{% if user.is_staff %}<a href="{{flowcell.get_admin_url}}"><img class="icon_button" src="/media/img/admin/icon_changelink.gif" alt="Edit"/></a>{% endif%}
   5   <br rel="rdf:type" resource="http://jumpgate.caltech.edu/wiki/LibraryOntology#illumina_flowcell"/>
   6   <div rel="libns:sequenced_by"
   7        resource="{{flowcell.sequencer.get_absolute_url}}">
   8   <b>Instrument</b>:
   9     <span property="libns:sequencer_name">{{ flowcell.sequencer.name }}</span>
  10     {% if flowcell.sequencer.instrument_name %}
  11     (<span property="libns:sequencer_instrument">{{ flowcell.sequencer.instrument_name}}</span>)
  12     {% endif %}
  13     <br/>
  14   <b>Instrument Model</b>:
  15     <span property="libns:sequencer_model">{{flowcell.sequencer.model}}</span>
  16     <br/>
  17   </div>
  18   {% for datarun in flowcell.datarun_set.all %}
  19   <b>Image Analysis</b>:
  20     <span property="libns:image_software">{{datarun.image_software}}</span>
  21     <span property="libns:image_version">{{datarun.image_version}}</span><br/>
  22   <b>Base Caller</b>:
  23     <span property="libns:basecall_software">{{datarun.basecall_software}}</span>
  24     <span property="libns:basecall_version">{{datarun.basecall_version}}</span><br/>
  25   <b>Alignment</b>:
  26     <span property="libns:alignment_software">{{datarun.alignment_software}}</span>
  27     <span property="libns:alignment_version">{{datarun.alignment_version}}</span><br/>
  28   {% endfor %}
  29   <b>Run Date</b>:
  30     <span property="libns:date" content="{{flowcell.run_date|date:'Y-m-d\TH:i:s'}}" datatype="xsd:dateTime">{{ flowcell.run_date }}</span><br/>
  31   <b>Type</b>:
  32     <span property="libns:flowcell_type">{{flowcell.flowcell_type}}</span><br/>
  33   <b>Read Length</b>:
  34     <span property="libns:read_length" datatype="xsd:decimal">{{flowcell.read_length}}</span><br/>
  35   <b>Control Lane</b>:
  36     <span property="libns:control_lane" datatype="xsd:decimal">{{flowcell.control_lane}}</span><br/>
  37
  38   <b>Notes</b>:
  39     <pre property="libns:flowcell_notes">{{flowcell.notes}}</pre>
  40   </div>