htsworkflow/frontend/templates/experiments/flowcell_lane_detail.html

   1 {% extends "base_site.html" %}
   2 {% load adminmedia humanize i18n %}
   3 {% block extrahead %}
   4     <!-- App Stuff -->
   5     <link type="text/css" rel="stylesheet" href="/static/css/app.css" />
   6     <script type="text/javascript" src="/static/js/jquery.min.js"></script>
   7
   8     {% block additional_javascript %}
   9     {% endblock %}
  10 {% endblock %}
  11
  12 {% block content %}
  13 <div id="lane_detail" class="htswdetail" rel="rdf:type" resource="libns:IlluminaLane">
  14   <div rel="libns:flowcell" resource="{{flowcell.get_absolute_url}}">
  15   {% include "experiments/flowcell_header.html" %}
  16   </div>
  17   <div class="flowcell_lane_detail">
  18   <h2>About this lane</h2>
  19   <b>Lane</b>:
  20     <span property="libns:lane_number" datatype="xsd:decimal">{{lane.lane_number}}</span><br/>
  21   <b>pM</b>:
  22     <span property="libns:pM" datatype="xsd:decimal">{{ lane.pM }}</span><br/>
  23   <b>Cluster Estimate</b>:
  24     <span property="libns:cluster_estimate" datatype="xsd:decimal"
  25           content="{{lane.cluster_estimate}}">{{ lane.cluster_estimate|intcomma }}</span><br/>
  26   <b>Lane Status</b>:
  27     <span property="libns:status">{{ lane.status }}</span><br/>
  28   <b>Comments</b>:
  29     <span property="libns:comment">{{ lane.comment }}</span><br/>
  30   </div>
  31   <hr/>
  32   {% include "sample_header.html" %}
  33   <hr/>
  34   <div class="htsw_flowcell_ivc">
  35   {% for run in flowcell.datarun_set.all %}
  36      <h2>Run {{ run.runfolder_name }}</h2>
  37      <table>
  38        <thead>
  39          <tr>
  40            <td>Lane</td>
  41            <td>IVC All</td>
  42            <td>IVC Call</td>
  43            <td>IVC Percent Base</td>
  44            <td>IVC Percent Base All</td>
  45            <td>IVC Percent Base Called</td>
  46          </tr>
  47        </thead>
  48        <tbody>
  49           {% for run, lane_number, lane_file_set in filtered_dataruns %}
  50           {% if lane_file_set.ivc_all %}
  51           <tr>
  52             <td>{{lane_number}}</td>
  53             <td>
  54               <a href="{{ lane_file_set.ivc_all.get_absolute_url }}">
  55               <img height="84" width="126" src="{{ lane_file_set.ivc_all.get_absolute_url }}"/></a>
  56             </td>
  57             <td>
  58               <a href="{{ lane_file_set.ivc_call.get_absolute_url }}">
  59               <img height="84" width="126" src="{{ lane_file_set.ivc_call.get_absolute_url }}"/>
  60               </a>
  61             </td>
  62             <td>
  63               <a href="{{ lane_file_set.ivc_percent_base.get_absolute_url }}">
  64               <img height="84" width="126" src="{{ lane_file_set.ivc_percent_base.get_absolute_url }}"/>
  65               </a>
  66             </td>
  67             <td>
  68               <a href="{{ lane_file_set.ivc_percent_all.get_absolute_url }}">
  69               <img height="84" width="126" src="{{ lane_file_set.ivc_percent_all.get_absolute_url }}"/>
  70               </a>
  71             </td>
  72             <td>
  73               <a href="{{ lane_file_set.ivc_percent_call.get_absolute_url }}">
  74               <img height="84" width="126" src="{{ lane_file_set.ivc_percent_call.get_absolute_url }}"/>
  75               </a>
  76             </td>
  77           </tr>
  78           {% endif %}
  79           {% endfor %}
  80        </tbody>
  81      </table>
  82   {% endfor %}
  83   </div>
  84 </div>
  85
  86 {% endblock %}