htsworkflow/frontend/templates/experiments/flowcell_lane_detail.html

   1 {% extends "base_site.html" %}
   2 {% load adminmedia humanize i18n %}
   3 {% block extrahead %}
   4     <!-- App Stuff -->
   5     <link type="text/css" rel="stylesheet" href="/static/css/app.css" />
   6     <script type="text/javascript" src="/static/js/jquery.min.js"></script>
   7
   8     {% block additional_javascript %}
   9     {% endblock %}
  10 {% endblock %}
  11
  12 {% block content %}
  13 <div id="lane_detail" class="htswdetail" rel="rdf:type" resource="libns:IlluminaLane">
  14   <div rel="libns:flowcell" resource="{{flowcell.get_absolute_url}}">
  15   {% include "experiments/flowcell_header.html" %}
  16   <div class="flowcell_lane_detail">
  17   <h2>About this lane</h2>
  18   <b>Lane</b>:
  19     <span property="libns:lane_number" datatype="xsd:decimal">{{lane.lane_number}}</span><br/>
  20   <b>pM</b>:
  21     <span property="libns:pM" datatype="xsd:decimal">{{ lane.pM }}</span><br/>
  22   <b>Cluster Estimate</b>:
  23     <span property="libns:cluster_estimate" datatype="xsd:decimal"
  24           content="{{lane.cluster_estimate}}">{{ lane.cluster_estimate|intcomma }}</span><br/>
  25   <b>Lane Status</b>:
  26     <span property="libns:status">{{ lane.status }}</span><br/>
  27   <b>Comments</b>:
  28     <span property="libns:comment">{{ lane.comment }}</span><br/>
  29   </div>
  30   <hr/>
  31   {% include "sample_header.html" %}
  32   <hr/>
  33   <div class="htsw_flowcell_ivc">
  34   {% for run in flowcell.datarun_set.all %}
  35      <h2>Run {{ run.runfolder_name }}</h2>
  36      <table>
  37        <thead>
  38          <tr>
  39            <td>Lane</td>
  40            <td>IVC All</td>
  41            <td>IVC Call</td>
  42            <td>IVC Percent Base</td>
  43            <td>IVC Percent Base All</td>
  44            <td>IVC Percent Base Called</td>
  45        </thead>
  46        <tbody>
  47           {% for run, lane_number, lane_file_set in filtered_dataruns %}
  48           {% if lane_file_set.ivc_all %}
  49           <tr>
  50             <td>{{lane_number}}</td>
  51             <td>
  52               <a href="{{ lane_file_set.ivc_all.get_absolute_url }}">
  53               <img height="84" width="126" src="{{ lane_file_set.ivc_all.get_absolute_url }}"/></a>
  54             </td>
  55             <td>
  56               <a href="{{ lane_file_set.ivc_call.get_absolute_url }}">
  57               <img height="84" width="126" src="{{ lane_file_set.ivc_call.get_absolute_url }}"/>
  58               </a>
  59             </td>
  60             <td>
  61               <a href="{{ lane_file_set.ivc_percent_base.get_absolute_url }}">
  62               <img height="84" width="126" src="{{ lane_file_set.ivc_percent_base.get_absolute_url }}"/>
  63               </a>
  64             </td>
  65             <td>
  66               <a href="{{ lane_file_set.ivc_percent_all.get_absolute_url }}">
  67               <img height="84" width="126" src="{{ lane_file_set.ivc_percent_all.get_absolute_url }}"/>
  68               </a>
  69             </td>
  70             <td>
  71               <a href="{{ lane_file_set.ivc_percent_call.get_absolute_url }}">
  72               <img height="84" width="126" src="{{ lane_file_set.ivc_percent_call.get_absolute_url }}"/>
  73               </a>
  74             </td>
  75           </tr>
  76           {% endif %}
  77           {% endfor %}
  78        </tbody>
  79      </table>
  80   {% endfor %}
  81   </div>
  82 {% endblock %}