htsworkflow/frontend/templates/sample_header.html

   1 <div id="librarydetail"  about="{{lib.get_absolute_url}}">
   2   <div class="library_identity">
   3     <h2>Library Name</h2>
   4     <b>Library ID</b>:
   5        <a href="{{lib.get_absolute_url}}"><span property="libns:library_id">{{ lib.id }}</span></a>
   6        {% if user.is_staff %}<a href="{{lib.get_admin_url}}"><img class="icon_button" src="/media/img/admin/icon_changelink.gif"/></a>{% endif %}
   7        <br/>
   8     <b>Name</b>:
   9       <span property="libns:name">{{ lib.library_name }}</span>
  10     <br/>
  11     <b>Affiliations</b>:
  12     <ul>
  13       {% for individual in lib.affiliations.all %}
  14         <li property="libns:affiliation" content="{{individual.name}}">
  15           {{ individual.name }} ( {{ individual.contact }} )
  16         </li>
  17       {% endfor %}
  18     </ul>
  19   </div>
  20   <div class="library_sample_detail">
  21     <h2>Sample Details</h2>
  22     <b>Species</b>:
  23       <span property="libns:species" content="{{lib.library_species.scientific_name}}"><a href="{{lib.library_species.get_absolute_url}}">{{ lib.library_species.scientific_name }}</a></span>
  24     <br/>
  25     <b>Experiment Type</b>:
  26        <span property="libns:experiment_type">{{ lib.experiment_type }}</span>
  27     <br/>
  28     {% if lib.antibody %}
  29     <b>Antibody</b>:
  30        <span property="libns:antibody">{{ lib.antibody.antibodies }}</span>
  31        {% if lib.antibody.antibodies.nickname %}
  32        (<span property="libns:antibody_term">{{ lib.antibody.nickname }}</span>)
  33        {% endif %}
  34     <br/>
  35     {% endif %}
  36     {% if lib.cell_line %}
  37     <b>Background or Cell Line</b>:
  38        <span property="libns:cell_line">{{ lib.cell_line }}</span>
  39     <br/>
  40     {% endif %}
  41     {% if lib.condition %}
  42     <b>Condition</b>:
  43        <span property="libns:condition">{{ lib.condition.condition_name }}</span>
  44        {% if lib.condition.nickname %}
  45        (<span property="libns:condition_term">{{ lib.condition.nickname }}</span>)
  46        {% endif %}
  47     <br/>
  48     {% endif %}
  49     {% if lib.replicate %}
  50     <b>Replicate</b>:
  51        <span property="libns:replicate">{{ lib.replicate }}</span>
  52     <br/>
  53     {% endif %}
  54   </div>
  55   <div class="library_library_detail">
  56     <h2>Library Details</h2>
  57     <b>Library Type</b>:
  58        <span property="libns:library_type">{{ lib.library_type }}</span>
  59     <br/>
  60     <b>Multiplex Index</b>:
  61        <span property="libns:multiplex_index">{{ lib.index_sequence_text }}</span>
  62     <br/>
  63     <b>Creation Date</b>
  64       <span property="libns:date" content="{{lib.creation_date|date:'Y-m-d'}}T00:00:00" datatype="xsd:dateTime">{{ lib.creation_date }}</span>
  65     <br/>
  66     <b>Made By</b>:
  67       <span property="libns:made_by">{{ lib.made_by }}</span>
  68     <br/>
  69     {% if lib.gel_cut_size %}
  70     <b>Gel Cut Size</b>:
  71       <span property="libns:gel_cut" datatype="xsd:decimal">{{ lib.gel_cut_size }}</span>
  72     <br/>
  73     {% endif %}
  74     {% if lib.insert_size %}
  75     <b>Insert Size</b>:
  76       <span property="libns:insert_size" datatype="xsd:decimal">{{ lib.insert_size }}</span>
  77     <br/>
  78     {% endif %}
  79     {% if lib.undiluted_concentration %}
  80     <b>Concentration</b>:
  81       <span property="libns:concentration">{{ lib.undiluted_concentration }} ng/µl</span>
  82     <br/>
  83     {% endif %}
  84     {% if lib.stopping_point_name %}
  85     <b>Protocol Stopping Point</b>
  86       <span property="libns:stopping_point">{{ lib.stopping_point_name }}</span>
  87     <br/>
  88     {% endif %}
  89   </div>