htsworkflow/frontend/templates/sample_header.html

   1 {% load staticfiles %}
   2 <div id="librarydetail"
   3      about="{{lib.get_absolute_url}}"
   4      typeof="libns:Library">
   5   <div class="library_identity">
   6     <h2>Library Name</h2>
   7     <b>Library ID</b>:
   8        <a href="{{lib.get_absolute_url}}"><span property="libns:library_id">{{ lib.id }}</span></a>
   9        {% if user.is_staff %}<a href="{{lib.get_admin_url}}"><img class="icon_button" src="{% static "admin/img/icon_changelink.gif" %}" alt="Edit"/></a>{% endif %}
  10        <br />
  11     <b>Name</b>:
  12       <span property="libns:name">{{ lib.library_name }}</span>
  13     <br/>
  14     <b>Affiliations</b>:
  15     <ul>
  16       {% for individual in lib.affiliations.all %}
  17         <li property="libns:affiliation" content="{{individual.name}}">
  18           {{ individual.name }} ( {{ individual.contact }} )
  19         </li>
  20       {% endfor %}
  21     </ul>
  22   </div>
  23   <div class="library_sample_detail">
  24     <h2>Sample Details</h2>
  25     <b>Species</b>:
  26       <span property="libns:species_name" content="{{lib.library_species.scientific_name}}"><a href="{{lib.library_species.get_absolute_url}}">{{ lib.library_species.scientific_name }}</a></span>
  27     <br/>
  28     <b>Experiment Type</b>:
  29        <span property="libns:experiment_type">{{ lib.experiment_type }}</span>
  30     <br/>
  31     {% if lib.antibody %}
  32     <b>Antibody</b>:
  33        <span property="libns:antibody">{{ lib.antibody.antibodies }}</span>
  34        {% if lib.antibody.antibodies.nickname %}
  35        (<span property="libns:antibody_term">{{ lib.antibody.nickname }}</span>)
  36        {% endif %}
  37     <br/>
  38     {% endif %}
  39     {% if lib.cell_line %}
  40     <b>Background or Cell Line</b>:
  41        <span property="libns:cell_line">{{ lib.cell_line }}</span>
  42     <br/>
  43     {% endif %}
  44     {% if lib.condition %}
  45     <b>Condition</b>:
  46        <span property="libns:condition">{{ lib.condition.condition_name }}</span>
  47        {% if lib.condition.nickname %}
  48        (<span property="libns:condition_term">{{ lib.condition.nickname }}</span>)
  49        {% endif %}
  50     <br/>
  51     {% endif %}
  52     {% if lib.replicate %}
  53     <b>Replicate</b>:
  54        <span property="libns:replicate">{{ lib.replicate }}</span>
  55     <br/>
  56     {% endif %}
  57   </div>
  58   <div class="library_library_detail">
  59     <h2>Library Details</h2>
  60     <b>Library Type</b>:
  61        <span property="libns:library_type">{{ lib.library_type }}</span>
  62     <br/>
  63     <b>Multiplex Index</b>:
  64        <span property="libns:multiplex_index">{{ lib.index_sequence_text }}</span>
  65     <br/>
  66     <b>Creation Date</b>
  67       <span property="libns:date" content="{{lib.creation_date|date:'Y-m-d'}}T00:00:00" datatype="xsd:dateTime">{{ lib.creation_date }}</span>
  68     <br/>
  69     <b>Made By</b>:
  70       <span property="libns:made_by">{{ lib.made_by }}</span>
  71     <br/>
  72     {% if lib.gel_cut_size %}
  73     <b>Gel Cut Size</b>:
  74       <span property="libns:gel_cut" datatype="xsd:integer">{{ lib.gel_cut_size }}</span>
  75     <br/>
  76     {% endif %}
  77     {% if lib.insert_size %}
  78     <b>Insert Size</b>:
  79       <span property="libns:insert_size" datatype="xsd:integer">{{ lib.insert_size }}</span>
  80     <br/>
  81     {% endif %}
  82     {% if lib.undiluted_concentration %}
  83     <b>Concentration</b>:
  84       <span property="libns:concentration">{{ lib.undiluted_concentration }} ng/µl</span>
  85     <br/>
  86     {% endif %}
  87     {% if lib.stopping_point_name %}
  88     <b>Protocol Stopping Point</b>
  89       <span property="libns:stopping_point">{{ lib.stopping_point_name }}</span>
  90     <br/>
  91     {% endif %}
  92   </div>
  93 </div>