htsworkflow/frontend/templates/sample_header.html

   1 <div id="librarydetail"
   2      about="{{lib.get_absolute_url}}"
   3      typeof="libns:Library">
   4   <div class="library_identity">
   5     <h2>Library Name</h2>
   6     <b>Library ID</b>:
   7        <a href="{{lib.get_absolute_url}}"><span property="libns:library_id">{{ lib.id }}</span></a>
   8        {% if user.is_staff %}<a href="{{lib.get_admin_url}}"><img class="icon_button" src="/media/img/admin/icon_changelink.gif" alt="Edit"/></a>{% endif %}
   9        <br />
  10     <b>Name</b>:
  11       <span property="libns:name">{{ lib.library_name }}</span>
  12     <br/>
  13     <b>Affiliations</b>:
  14     <ul>
  15       {% for individual in lib.affiliations.all %}
  16         <li property="libns:affiliation" content="{{individual.name}}">
  17           {{ individual.name }} ( {{ individual.contact }} )
  18         </li>
  19       {% endfor %}
  20     </ul>
  21   </div>
  22   <div class="library_sample_detail">
  23     <h2>Sample Details</h2>
  24     <b>Species</b>:
  25       <span property="libns:species_name" content="{{lib.library_species.scientific_name}}"><a href="{{lib.library_species.get_absolute_url}}">{{ lib.library_species.scientific_name }}</a></span>
  26     <br/>
  27     <b>Experiment Type</b>:
  28        <span property="libns:experiment_type">{{ lib.experiment_type }}</span>
  29     <br/>
  30     {% if lib.antibody %}
  31     <b>Antibody</b>:
  32        <span property="libns:antibody">{{ lib.antibody.antibodies }}</span>
  33        {% if lib.antibody.antibodies.nickname %}
  34        (<span property="libns:antibody_term">{{ lib.antibody.nickname }}</span>)
  35        {% endif %}
  36     <br/>
  37     {% endif %}
  38     {% if lib.cell_line %}
  39     <b>Background or Cell Line</b>:
  40        <span property="libns:cell_line">{{ lib.cell_line }}</span>
  41     <br/>
  42     {% endif %}
  43     {% if lib.condition %}
  44     <b>Condition</b>:
  45        <span property="libns:condition">{{ lib.condition.condition_name }}</span>
  46        {% if lib.condition.nickname %}
  47        (<span property="libns:condition_term">{{ lib.condition.nickname }}</span>)
  48        {% endif %}
  49     <br/>
  50     {% endif %}
  51     {% if lib.replicate %}
  52     <b>Replicate</b>:
  53        <span property="libns:replicate">{{ lib.replicate }}</span>
  54     <br/>
  55     {% endif %}
  56   </div>
  57   <div class="library_library_detail">
  58     <h2>Library Details</h2>
  59     <b>Library Type</b>:
  60        <span property="libns:library_type">{{ lib.library_type }}</span>
  61     <br/>
  62     <b>Multiplex Index</b>:
  63        <span property="libns:multiplex_index">{{ lib.index_sequence_text }}</span>
  64     <br/>
  65     <b>Creation Date</b>
  66       <span property="libns:date" content="{{lib.creation_date|date:'Y-m-d'}}T00:00:00" datatype="xsd:dateTime">{{ lib.creation_date }}</span>
  67     <br/>
  68     <b>Made By</b>:
  69       <span property="libns:made_by">{{ lib.made_by }}</span>
  70     <br/>
  71     {% if lib.gel_cut_size %}
  72     <b>Gel Cut Size</b>:
  73       <span property="libns:gel_cut" datatype="xsd:integer">{{ lib.gel_cut_size }}</span>
  74     <br/>
  75     {% endif %}
  76     {% if lib.insert_size %}
  77     <b>Insert Size</b>:
  78       <span property="libns:insert_size" datatype="xsd:integer">{{ lib.insert_size }}</span>
  79     <br/>
  80     {% endif %}
  81     {% if lib.undiluted_concentration %}
  82     <b>Concentration</b>:
  83       <span property="libns:concentration">{{ lib.undiluted_concentration }} ng/µl</span>
  84     <br/>
  85     {% endif %}
  86     {% if lib.stopping_point_name %}
  87     <b>Protocol Stopping Point</b>
  88       <span property="libns:stopping_point">{{ lib.stopping_point_name }}</span>
  89     <br/>
  90     {% endif %}
  91   </div>
  92 </div>