htsworkflow/pipelines/test/testdata/rta_intensities_config_1.12.4.2.xml

   1 <?xml version="1.0" encoding="utf-8"?>\r
   2 <ImageAnalysis xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xmlns:xsd="http://www.w3.org/2001/XMLSchema">\r
   3   <Run Name="Intensities">\r
   4     <Cycles First="1" Last="57" Number="57" />\r
   5     <ImageParameters>\r
   6       <AutoOffsetFlag>0</AutoOffsetFlag>\r
   7       <AutoSizeFlag>0</AutoSizeFlag>\r
   8       <Fwhm>0</Fwhm>\r
   9       <RemappingDistance>0</RemappingDistance>\r
  10       <Threshold>0</Threshold>\r
  11     </ImageParameters>\r
  12     <RunParameters>\r
  13       <AutoCycleFlag>0</AutoCycleFlag>\r
  14       <BasecallFlag>0</BasecallFlag>\r
  15       <Deblocked>0</Deblocked>\r
  16       <DebugFlag>0</DebugFlag>\r
  17       <FirstRunOnlyFlag>0</FirstRunOnlyFlag>\r
  18       <ImagingReads Index="1">\r
  19         <FirstCycle>1</FirstCycle>\r
  20         <LastCycle>50</LastCycle>\r
  21         <RunFolder>110815_SN787_0101_AD07K6ACXX</RunFolder>\r
  22       </ImagingReads>\r
  23       <ImagingReads Index="2">\r
  24         <FirstCycle>51</FirstCycle>\r
  25         <LastCycle>57</LastCycle>\r
  26         <RunFolder>110815_SN787_0101_AD07K6ACXX</RunFolder>\r
  27       </ImagingReads>\r
  28       <Instrument>HWI-ST0787</Instrument>\r
  29       <IterativeMatrixFlag>0</IterativeMatrixFlag>\r
  30       <MakeFlag>0</MakeFlag>\r
  31       <MaxCycle>0</MaxCycle>\r
  32       <MinCycle>0</MinCycle>\r
  33       <Reads Index="1">\r
  34         <FirstCycle>1</FirstCycle>\r
  35         <LastCycle>50</LastCycle>\r
  36         <RunFolder>110815_SN787_0101_AD07K6ACXX</RunFolder>\r
  37       </Reads>\r
  38       <Reads Index="2">\r
  39         <FirstCycle>51</FirstCycle>\r
  40         <LastCycle>57</LastCycle>\r
  41         <RunFolder>110815_SN787_0101_AD07K6ACXX</RunFolder>\r
  42       </Reads>\r
  43       <RunFolder>110815_SN787_0101_AD07K6ACXX</RunFolder>\r
  44       <RunFolderDate>110815</RunFolderDate>\r
  45       <RunFolderId>0101</RunFolderId>\r
  46       <RunFlowcellId>D07K6ACXX</RunFlowcellId>\r
  47       <Barcode>\r
  48         <Cycle Use="true">51</Cycle>\r
  49         <Cycle Use="true">52</Cycle>\r
  50         <Cycle Use="true">53</Cycle>\r
  51         <Cycle Use="true">54</Cycle>\r
  52         <Cycle Use="true">55</Cycle>\r
  53         <Cycle Use="true">56</Cycle>\r
  54         <Cycle Use="true">57</Cycle>\r
  55       </Barcode>\r
  56       <QTableVersion>New6</QTableVersion>\r
  57     </RunParameters>\r
  58     <Software Name="RTA" Version="1.12.4.2" />\r
  59     <TileSelection>\r
  60       <Lane Index="1">\r
  61         <Sample>s</Sample>\r
  62         <Tile>1101</Tile>\r
  63         <Tile>1102</Tile>\r
  64         <Tile>1104</Tile>\r
  65         <Tile>1103</Tile>\r
  66         <Tile>1106</Tile>\r
  67         <Tile>1105</Tile>\r
  68         <Tile>1108</Tile>\r
  69         <Tile>1107</Tile>\r
  70         <Tile>1201</Tile>\r
  71         <Tile>1204</Tile>\r
  72         <Tile>1202</Tile>\r
  73         <Tile>1205</Tile>\r
  74         <Tile>1206</Tile>\r
  75         <Tile>1208</Tile>\r
  76         <Tile>1301</Tile>\r
  77         <Tile>1302</Tile>\r
  78         <Tile>1304</Tile>\r
  79         <Tile>1203</Tile>\r
  80         <Tile>1305</Tile>\r
  81         <Tile>1306</Tile>\r
  82         <Tile>1308</Tile>\r
  83         <Tile>2102</Tile>\r
  84         <Tile>2101</Tile>\r
  85         <Tile>1207</Tile>\r
  86         <Tile>2105</Tile>\r
  87         <Tile>2106</Tile>\r
  88         <Tile>2104</Tile>\r
  89         <Tile>1303</Tile>\r
  90         <Tile>2201</Tile>\r
  91         <Tile>2202</Tile>\r
  92         <Tile>1307</Tile>\r
  93         <Tile>2206</Tile>\r
  94         <Tile>2205</Tile>\r
  95         <Tile>2108</Tile>\r
  96         <Tile>2302</Tile>\r
  97         <Tile>2103</Tile>\r
  98         <Tile>2301</Tile>\r
  99         <Tile>2204</Tile>\r
 100         <Tile>2305</Tile>\r
 101         <Tile>2107</Tile>\r
 102         <Tile>2203</Tile>\r
 103         <Tile>2208</Tile>\r
 104         <Tile>2306</Tile>\r
 105         <Tile>2207</Tile>\r
 106         <Tile>2304</Tile>\r
 107         <Tile>2303</Tile>\r
 108         <Tile>2308</Tile>\r
 109         <Tile>2307</Tile>\r
 110       </Lane>\r
 111       <Lane Index="2">\r
 112         <Sample>s</Sample>\r
 113         <Tile>1101</Tile>\r
 114         <Tile>1105</Tile>\r
 115         <Tile>1102</Tile>\r
 116         <Tile>1106</Tile>\r
 117         <Tile>1201</Tile>\r
 118         <Tile>1103</Tile>\r
 119         <Tile>1104</Tile>\r
 120         <Tile>1202</Tile>\r
 121         <Tile>1205</Tile>\r
 122         <Tile>1107</Tile>\r
 123         <Tile>1206</Tile>\r
 124         <Tile>1108</Tile>\r
 125         <Tile>1203</Tile>\r
 126         <Tile>1302</Tile>\r
 127         <Tile>1204</Tile>\r
 128         <Tile>1301</Tile>\r
 129         <Tile>1208</Tile>\r
 130         <Tile>1207</Tile>\r
 131         <Tile>1305</Tile>\r
 132         <Tile>1306</Tile>\r
 133         <Tile>1304</Tile>\r
 134         <Tile>2101</Tile>\r
 135         <Tile>1303</Tile>\r
 136         <Tile>2102</Tile>\r
 137         <Tile>1308</Tile>\r
 138         <Tile>2105</Tile>\r
 139         <Tile>1307</Tile>\r
 140         <Tile>2106</Tile>\r
 141         <Tile>2201</Tile>\r
 142         <Tile>2104</Tile>\r
 143         <Tile>2103</Tile>\r
 144         <Tile>2202</Tile>\r
 145         <Tile>2205</Tile>\r
 146         <Tile>2107</Tile>\r
 147         <Tile>2108</Tile>\r
 148         <Tile>2206</Tile>\r
 149         <Tile>2301</Tile>\r
 150         <Tile>2203</Tile>\r
 151         <Tile>2204</Tile>\r
 152         <Tile>2208</Tile>\r
 153         <Tile>2207</Tile>\r
 154         <Tile>2302</Tile>\r
 155         <Tile>2305</Tile>\r
 156         <Tile>2303</Tile>\r
 157         <Tile>2304</Tile>\r
 158         <Tile>2306</Tile>\r
 159         <Tile>2307</Tile>\r
 160         <Tile>2308</Tile>\r
 161       </Lane>\r
 162       <Lane Index="3">\r
 163         <Sample>s</Sample>\r
 164         <Tile>1101</Tile>\r
 165         <Tile>1103</Tile>\r
 166         <Tile>1102</Tile>\r
 167         <Tile>1104</Tile>\r
 168         <Tile>1105</Tile>\r
 169         <Tile>1106</Tile>\r
 170         <Tile>1107</Tile>\r
 171         <Tile>1108</Tile>\r
 172         <Tile>1201</Tile>\r
 173         <Tile>1204</Tile>\r
 174         <Tile>1202</Tile>\r
 175         <Tile>1203</Tile>\r
 176         <Tile>1205</Tile>\r
 177         <Tile>1206</Tile>\r
 178         <Tile>1207</Tile>\r
 179         <Tile>1208</Tile>\r
 180         <Tile>1302</Tile>\r
 181         <Tile>1301</Tile>\r
 182         <Tile>1303</Tile>\r
 183         <Tile>1304</Tile>\r
 184         <Tile>1306</Tile>\r
 185         <Tile>1305</Tile>\r
 186         <Tile>1308</Tile>\r
 187         <Tile>2101</Tile>\r
 188         <Tile>2102</Tile>\r
 189         <Tile>2105</Tile>\r
 190         <Tile>1307</Tile>\r
 191         <Tile>2104</Tile>\r
 192         <Tile>2106</Tile>\r
 193         <Tile>2201</Tile>\r
 194         <Tile>2108</Tile>\r
 195         <Tile>2103</Tile>\r
 196         <Tile>2107</Tile>\r
 197         <Tile>2202</Tile>\r
 198         <Tile>2205</Tile>\r
 199         <Tile>2204</Tile>\r
 200         <Tile>2301</Tile>\r
 201         <Tile>2206</Tile>\r
 202         <Tile>2305</Tile>\r
 203         <Tile>2203</Tile>\r
 204         <Tile>2208</Tile>\r
 205         <Tile>2302</Tile>\r
 206         <Tile>2207</Tile>\r
 207         <Tile>2304</Tile>\r
 208         <Tile>2306</Tile>\r
 209         <Tile>2303</Tile>\r
 210         <Tile>2308</Tile>\r
 211         <Tile>2307</Tile>\r
 212       </Lane>\r
 213       <Lane Index="4">\r
 214         <Sample>s</Sample>\r
 215         <Tile>1101</Tile>\r
 216         <Tile>1105</Tile>\r
 217         <Tile>1201</Tile>\r
 218         <Tile>1102</Tile>\r
 219         <Tile>1106</Tile>\r
 220         <Tile>1205</Tile>\r
 221         <Tile>1104</Tile>\r
 222         <Tile>1202</Tile>\r
 223         <Tile>1103</Tile>\r
 224         <Tile>1301</Tile>\r
 225         <Tile>1206</Tile>\r
 226         <Tile>1108</Tile>\r
 227         <Tile>1107</Tile>\r
 228         <Tile>1305</Tile>\r
 229         <Tile>1302</Tile>\r
 230         <Tile>2101</Tile>\r
 231         <Tile>1203</Tile>\r
 232         <Tile>1306</Tile>\r
 233         <Tile>1204</Tile>\r
 234         <Tile>1207</Tile>\r
 235         <Tile>2102</Tile>\r
 236         <Tile>1208</Tile>\r
 237         <Tile>2105</Tile>\r
 238         <Tile>1303</Tile>\r
 239         <Tile>2106</Tile>\r
 240         <Tile>1304</Tile>\r
 241         <Tile>2201</Tile>\r
 242         <Tile>1307</Tile>\r
 243         <Tile>1308</Tile>\r
 244         <Tile>2202</Tile>\r
 245         <Tile>2103</Tile>\r
 246         <Tile>2104</Tile>\r
 247         <Tile>2205</Tile>\r
 248         <Tile>2206</Tile>\r
 249         <Tile>2302</Tile>\r
 250         <Tile>2108</Tile>\r
 251         <Tile>2301</Tile>\r
 252         <Tile>2107</Tile>\r
 253         <Tile>2305</Tile>\r
 254         <Tile>2306</Tile>\r
 255         <Tile>2204</Tile>\r
 256         <Tile>2203</Tile>\r
 257         <Tile>2208</Tile>\r
 258         <Tile>2207</Tile>\r
 259         <Tile>2303</Tile>\r
 260         <Tile>2304</Tile>\r
 261         <Tile>2308</Tile>\r
 262         <Tile>2307</Tile>\r
 263       </Lane>\r
 264       <Lane Index="5">\r
 265         <Sample>s</Sample>\r
 266         <Tile>1102</Tile>\r
 267         <Tile>1101</Tile>\r
 268         <Tile>1106</Tile>\r
 269         <Tile>1105</Tile>\r
 270         <Tile>1202</Tile>\r
 271         <Tile>1201</Tile>\r
 272         <Tile>1205</Tile>\r
 273         <Tile>1206</Tile>\r
 274         <Tile>1301</Tile>\r
 275         <Tile>1104</Tile>\r
 276         <Tile>1302</Tile>\r
 277         <Tile>1103</Tile>\r
 278         <Tile>1108</Tile>\r
 279         <Tile>1305</Tile>\r
 280         <Tile>1306</Tile>\r
 281         <Tile>1107</Tile>\r
 282         <Tile>2102</Tile>\r
 283         <Tile>1203</Tile>\r
 284         <Tile>1204</Tile>\r
 285         <Tile>2101</Tile>\r
 286         <Tile>2106</Tile>\r
 287         <Tile>1207</Tile>\r
 288         <Tile>2202</Tile>\r
 289         <Tile>1303</Tile>\r
 290         <Tile>1208</Tile>\r
 291         <Tile>2105</Tile>\r
 292         <Tile>2201</Tile>\r
 293         <Tile>1304</Tile>\r
 294         <Tile>1307</Tile>\r
 295         <Tile>2206</Tile>\r
 296         <Tile>2103</Tile>\r
 297         <Tile>2205</Tile>\r
 298         <Tile>2302</Tile>\r
 299         <Tile>2107</Tile>\r
 300         <Tile>1308</Tile>\r
 301         <Tile>2301</Tile>\r
 302         <Tile>2203</Tile>\r
 303         <Tile>2104</Tile>\r
 304         <Tile>2305</Tile>\r
 305         <Tile>2207</Tile>\r
 306         <Tile>2108</Tile>\r
 307         <Tile>2306</Tile>\r
 308         <Tile>2303</Tile>\r
 309         <Tile>2204</Tile>\r
 310         <Tile>2307</Tile>\r
 311         <Tile>2208</Tile>\r
 312         <Tile>2304</Tile>\r
 313         <Tile>2308</Tile>\r
 314       </Lane>\r
 315       <Lane Index="6">\r
 316         <Sample>s</Sample>\r
 317         <Tile>1101</Tile>\r
 318         <Tile>1102</Tile>\r
 319         <Tile>1103</Tile>\r
 320         <Tile>1106</Tile>\r
 321         <Tile>1105</Tile>\r
 322         <Tile>1107</Tile>\r
 323         <Tile>1202</Tile>\r
 324         <Tile>1201</Tile>\r
 325         <Tile>1203</Tile>\r
 326         <Tile>1207</Tile>\r
 327         <Tile>1205</Tile>\r
 328         <Tile>1206</Tile>\r
 329         <Tile>1301</Tile>\r
 330         <Tile>1303</Tile>\r
 331         <Tile>1302</Tile>\r
 332         <Tile>1104</Tile>\r
 333         <Tile>1305</Tile>\r
 334         <Tile>1306</Tile>\r
 335         <Tile>2101</Tile>\r
 336         <Tile>1108</Tile>\r
 337         <Tile>2102</Tile>\r
 338         <Tile>1307</Tile>\r
 339         <Tile>2103</Tile>\r
 340         <Tile>2105</Tile>\r
 341         <Tile>1204</Tile>\r
 342         <Tile>2106</Tile>\r
 343         <Tile>2107</Tile>\r
 344         <Tile>2201</Tile>\r
 345         <Tile>2202</Tile>\r
 346         <Tile>1208</Tile>\r
 347         <Tile>2203</Tile>\r
 348         <Tile>2206</Tile>\r
 349         <Tile>2205</Tile>\r
 350         <Tile>1304</Tile>\r
 351         <Tile>2302</Tile>\r
 352         <Tile>2207</Tile>\r
 353         <Tile>2301</Tile>\r
 354         <Tile>1308</Tile>\r
 355         <Tile>2306</Tile>\r
 356         <Tile>2303</Tile>\r
 357         <Tile>2305</Tile>\r
 358         <Tile>2307</Tile>\r
 359         <Tile>2104</Tile>\r
 360         <Tile>2108</Tile>\r
 361         <Tile>2204</Tile>\r
 362         <Tile>2208</Tile>\r
 363         <Tile>2304</Tile>\r
 364         <Tile>2308</Tile>\r
 365       </Lane>\r
 366       <Lane Index="7">\r
 367         <Sample>s</Sample>\r
 368         <Tile>1102</Tile>\r
 369         <Tile>1106</Tile>\r
 370         <Tile>1101</Tile>\r
 371         <Tile>1105</Tile>\r
 372         <Tile>1202</Tile>\r
 373         <Tile>1201</Tile>\r
 374         <Tile>1206</Tile>\r
 375         <Tile>1205</Tile>\r
 376         <Tile>1103</Tile>\r
 377         <Tile>1302</Tile>\r
 378         <Tile>1301</Tile>\r
 379         <Tile>1107</Tile>\r
 380         <Tile>1306</Tile>\r
 381         <Tile>1305</Tile>\r
 382         <Tile>1203</Tile>\r
 383         <Tile>2101</Tile>\r
 384         <Tile>2102</Tile>\r
 385         <Tile>2105</Tile>\r
 386         <Tile>1207</Tile>\r
 387         <Tile>2106</Tile>\r
 388         <Tile>2201</Tile>\r
 389         <Tile>2202</Tile>\r
 390         <Tile>2205</Tile>\r
 391         <Tile>1303</Tile>\r
 392         <Tile>1307</Tile>\r
 393         <Tile>2206</Tile>\r
 394         <Tile>2301</Tile>\r
 395         <Tile>2103</Tile>\r
 396         <Tile>2305</Tile>\r
 397         <Tile>2302</Tile>\r
 398         <Tile>2107</Tile>\r
 399         <Tile>2306</Tile>\r
 400         <Tile>2203</Tile>\r
 401         <Tile>2207</Tile>\r
 402         <Tile>2303</Tile>\r
 403         <Tile>2307</Tile>\r
 404         <Tile>1104</Tile>\r
 405         <Tile>1108</Tile>\r
 406         <Tile>1204</Tile>\r
 407         <Tile>1208</Tile>\r
 408         <Tile>1304</Tile>\r
 409         <Tile>1308</Tile>\r
 410         <Tile>2104</Tile>\r
 411         <Tile>2108</Tile>\r
 412         <Tile>2204</Tile>\r
 413         <Tile>2208</Tile>\r
 414         <Tile>2304</Tile>\r
 415         <Tile>2308</Tile>\r
 416       </Lane>\r
 417       <Lane Index="8">\r
 418         <Sample>s</Sample>\r
 419         <Tile>1101</Tile>\r
 420         <Tile>1102</Tile>\r
 421         <Tile>1105</Tile>\r
 422         <Tile>1106</Tile>\r
 423         <Tile>1201</Tile>\r
 424         <Tile>1202</Tile>\r
 425         <Tile>1103</Tile>\r
 426         <Tile>1205</Tile>\r
 427         <Tile>1206</Tile>\r
 428         <Tile>1107</Tile>\r
 429         <Tile>1301</Tile>\r
 430         <Tile>1302</Tile>\r
 431         <Tile>1203</Tile>\r
 432         <Tile>1306</Tile>\r
 433         <Tile>1305</Tile>\r
 434         <Tile>1207</Tile>\r
 435         <Tile>2101</Tile>\r
 436         <Tile>1303</Tile>\r
 437         <Tile>2102</Tile>\r
 438         <Tile>1307</Tile>\r
 439         <Tile>2105</Tile>\r
 440         <Tile>2103</Tile>\r
 441         <Tile>2106</Tile>\r
 442         <Tile>2201</Tile>\r
 443         <Tile>2107</Tile>\r
 444         <Tile>2205</Tile>\r
 445         <Tile>2202</Tile>\r
 446         <Tile>2206</Tile>\r
 447         <Tile>2203</Tile>\r
 448         <Tile>2301</Tile>\r
 449         <Tile>2305</Tile>\r
 450         <Tile>2302</Tile>\r
 451         <Tile>2306</Tile>\r
 452         <Tile>1104</Tile>\r
 453         <Tile>2207</Tile>\r
 454         <Tile>1108</Tile>\r
 455         <Tile>1204</Tile>\r
 456         <Tile>2303</Tile>\r
 457         <Tile>2307</Tile>\r
 458         <Tile>1208</Tile>\r
 459         <Tile>1304</Tile>\r
 460         <Tile>1308</Tile>\r
 461         <Tile>2104</Tile>\r
 462         <Tile>2108</Tile>\r
 463         <Tile>2204</Tile>\r
 464         <Tile>2208</Tile>\r
 465         <Tile>2304</Tile>\r
 466         <Tile>2308</Tile>\r
 467       </Lane>\r
 468     </TileSelection>\r
 469     <Time />\r
 470     <User />\r
 471   </Run>\r
 472 </ImageAnalysis>