1 from setuptools import setup
2 from version import get_git_version
6 version=get_git_version(),
7 description="Utilities to help manage high-through-put sequencing",
8 author="Diane Trout, Brandon King",
9 author_email="diane@caltech.edu",
10 packages=["htsworkflow",
11 "htsworkflow.automation",
12 "htsworkflow.pipelines",
15 "htsworkflow.frontend",
16 "htsworkflow.frontend.analysis",
17 "htsworkflow.frontend.eland_config",
18 "htsworkflow.frontend.experiments",
19 "htsworkflow.frontend.inventory",
20 "htsworkflow.frontend.reports",
21 "htsworkflow.frontend.samples",
24 "scripts/htsw-copier",
25 "scripts/htsw-eland2bed",
26 "scripts/htsw-elandseq",
27 "scripts/htsw-gerald2bed",
28 "scripts/htsw-get-config",
29 "scripts/htsw-qseq2fastq",
30 "scripts/htsw-record-runfolder",
31 "scripts/htsw-runfolder",
32 "scripts/htsw-runner",
33 "scripts/htsw-spoolwatcher",
35 "scripts/htsw-srf2fastq",
36 "scripts/htsw-update-archive",
37 "scripts/htsw-validate",