setup.py

   1 from setuptools import setup
   2 from version import get_git_version
   3
   4 setup(
   5     name="htsworkflow",
   6     version=get_git_version(),
   7     description="Utilities to help manage high-through-put sequencing",
   8     author="Diane Trout, Brandon King",
   9     author_email="diane@caltech.edu",
  10     packages=["htsworkflow",
  11               "htsworkflow.automation",
  12               "htsworkflow.pipelines",
  13               "htsworkflow.util",
  14               # django site
  15               "htsworkflow.frontend",
  16               "htsworkflow.frontend.analysis",
  17               "htsworkflow.frontend.eland_config",
  18               "htsworkflow.frontend.experiments",
  19               "htsworkflow.frontend.inventory",
  20               "htsworkflow.frontend.reports",
  21               "htsworkflow.frontend.samples",
  22               ],
  23     scripts=[
  24         "scripts/htsw-copier",
  25         "scripts/htsw-eland2bed",
  26         "scripts/htsw-elandseq",
  27         "scripts/htsw-gerald2bed",
  28         "scripts/htsw-get-config",
  29         "scripts/htsw-qseq2fastq",
  30         "scripts/htsw-record-runfolder",
  31         "scripts/htsw-runfolder",
  32         "scripts/htsw-runner",
  33         "scripts/htsw-spoolwatcher",
  34         "scripts/htsw-srf",
  35         "scripts/htsw-srf2fastq",
  36         "scripts/htsw-update-archive",
  37         "scripts/htsw-validate",
  38         ],
  39     )