1 from setuptools import setup
5 description="some bots and other utilities to help deal with data from an illumina sequencer",
6 author="Diane Trout & Brandon King",
7 author_email="diane@caltech.edu",
8 packages=["htsworkflow",
9 "htsworkflow.pipelines",
10 "htsworkflow.frontend",
11 "htsworkflow.frontend.analysis",
12 "htsworkflow.frontend.eland_config",
13 "htsworkflow.frontend.experiments",
14 "htsworkflow.frontend.inventory",
15 "htsworkflow.frontend.reports",
16 "htsworkflow.frontend.samples",
17 "htsworkflow.automation",
21 'scripts/configure_pipeline',
23 'scripts/gerald2bed.py',
26 'scripts/make-library-tree',
27 'scripts/mark_archived_data',
29 'scripts/rerun_eland.py',
30 'scripts/retrieve_config',
33 'scripts/spoolwatcher',
35 'scripts/srf2named_fastq.py'