2 <h1>Summary Information For Experiment 090313_HWI-EAS229_0101_3021JAAXX</h1>
4 <table border="1" cellpadding="5">
11 <td>090313_HWI-EAS229_0101_3021JAAXX</td>
18 <h2>Chip Results Summary</h2>
19 <table border="1" cellpadding="5">
22 <td>Clusters (PF)</td>
23 <td>Yield (kbases)</td>
31 <h2>Lane Parameter Summary</h2>
32 <table border="1" cellpadding="5">
36 <td>Sample Target</td>
40 <td>Chast. Thresh.</td>
48 <td>ELAND_EXTENDED</td>
50 <td>'((FAILED_CHASTITY<=1.000000))'</td>
60 <td>ELAND_EXTENDED</td>
62 <td>'((FAILED_CHASTITY<=1.000000))'</td>
72 <td>ELAND_EXTENDED</td>
74 <td>'((FAILED_CHASTITY<=1.000000))'</td>
84 <td>ELAND_EXTENDED</td>
86 <td>'((FAILED_CHASTITY<=1.000000))'</td>
96 <td>ELAND_EXTENDED</td>
98 <td>'((FAILED_CHASTITY<=1.000000))'</td>
101 <td><a href="#Lane5">
108 <td>ELAND_EXTENDED</td>
110 <td>'((FAILED_CHASTITY<=1.000000))'</td>
113 <td><a href="#Lane6">
120 <td>ELAND_EXTENDED</td>
122 <td>'((FAILED_CHASTITY<=1.000000))'</td>
125 <td><a href="#Lane7">
132 <td>ELAND_EXTENDED</td>
134 <td>'((FAILED_CHASTITY<=1.000000))'</td>
137 <td><a href="#Lane8">
141 <h2>Lane Results Summary</h2>
142 <table border="1" cellpadding="5">
144 <td colspan="2">Lane Info</td>
145 <td colspan="8">Tile Mean +/- SD for Lane</td>
149 <td>Lane Yield (kbases) </td>
150 <td>Clusters (raw)</td>
151 <td>Clusters (PF) </td>
152 <td>1st Cycle Int (PF) </td>
153 <td>% intensity after 20 cycles (PF) </td>
154 <td>% PF Clusters </td>
155 <td>% Align (PF) </td>
156 <td>Alignment Score (PF) </td>
157 <td>% Error Rate (PF) </td>
162 <td>126910 +/- 4300</td>
163 <td>15590 +/- 4874</td>
165 <td>124.36 +/- 27.05</td>
166 <td>12.29 +/- 3.82</td>
167 <td>7.36 +/- 1.84</td>
168 <td>5.92 +/- 1.64</td>
169 <td>4.52 +/- 0.58</td>
174 <td>165739 +/- 6792</td>
175 <td>21255 +/- 5034</td>
177 <td>88.44 +/- 20.59</td>
178 <td>12.94 +/- 3.52</td>
179 <td>13.55 +/- 0.83</td>
180 <td>12.33 +/- 0.84</td>
181 <td>5.05 +/- 0.24</td>
186 <td>196565 +/- 8216</td>
187 <td>18559 +/- 5413</td>
189 <td>78.51 +/- 19.65</td>
190 <td>9.41 +/- 2.64</td>
191 <td>1.07 +/- 0.10</td>
192 <td>0.81 +/- 0.08</td>
193 <td>6.27 +/- 0.46</td>
198 <td>153897 +/- 8501</td>
199 <td>34128 +/- 7984</td>
201 <td>110.44 +/- 26.03</td>
202 <td>22.13 +/- 4.82</td>
203 <td>4.53 +/- 0.36</td>
204 <td>4.51 +/- 0.38</td>
205 <td>3.58 +/- 0.22</td>
210 <td>135536 +/- 3908</td>
211 <td>31420 +/- 5039</td>
213 <td>116.68 +/- 24.46</td>
214 <td>23.21 +/- 3.84</td>
215 <td>4.25 +/- 0.39</td>
216 <td>4.19 +/- 0.41</td>
217 <td>3.62 +/- 0.26</td>
222 <td>154083 +/- 9315</td>
223 <td>43035 +/- 10193</td>
225 <td>123.00 +/- 28.80</td>
226 <td>27.76 +/- 5.59</td>
227 <td>3.64 +/- 0.30</td>
228 <td>3.53 +/- 0.31</td>
229 <td>3.48 +/- 0.30</td>
234 <td>159991 +/- 9292</td>
235 <td>48859 +/- 8420</td>
237 <td>121.76 +/- 24.75</td>
238 <td>30.47 +/- 4.53</td>
239 <td>0.86 +/- 0.10</td>
240 <td>0.58 +/- 0.07</td>
241 <td>3.11 +/- 0.36</td>
246 <td>198479 +/- 17671</td>
247 <td>6625 +/- 1773</td>
249 <td>73.80 +/- 14.41</td>
250 <td>3.30 +/- 0.68</td>
251 <td>48.65 +/- 5.61</td>
252 <td>43.07 +/- 6.50</td>
253 <td>3.28 +/- 0.29</td>
255 <tr><td colspan="13">Tile mean across chip</td></tr>
257 <td colspan="2">Average</td>
268 <h2>Expanded Lane Summary</h2>
269 <table border="1" cellpadding="5">
271 <td colspan="2">Lane Info</td>
272 <td colspan="2">Phasing Info</td>
273 <td colspan="2">Raw Data (tile mean)</td>
274 <td colspan="7">Filtered Data (tile mean)</td>
278 <td> Clusters (tile mean) (raw) </td>
280 <td>% Prephasing </td>
281 <td>% Error Rate (raw) </td>
282 <td> Equiv Perfect Clusters (raw) </td>
284 <td>Cycle 2-4 Av Int (PF) </td>
285 <td>Cycle 2-10 Av % Loss (PF) </td>
286 <td>Cycle 10-20 Av % Loss (PF) </td>
287 <td>% Align (PF) </td>
288 <td> % Error Rate (PF) </td>
289 <td> Equiv Perfect Clusters (PF) </td>
299 <td>65.81 +/- 15.68</td>
300 <td>-0.47 +/- 1.84</td>
301 <td>2.12 +/- 1.13</td>
314 <td>76.73 +/- 12.15</td>
315 <td>1.47 +/- 1.92</td>
316 <td>1.21 +/- 1.90</td>
329 <td>103.17 +/- 13.33</td>
330 <td>2.71 +/- 1.99</td>
331 <td>1.26 +/- 1.88</td>
344 <td>95.07 +/- 11.42</td>
345 <td>1.28 +/- 2.12</td>
346 <td>2.69 +/- 1.55</td>
359 <td>87.51 +/- 10.87</td>
360 <td>1.01 +/- 2.07</td>
361 <td>2.00 +/- 1.53</td>
374 <td>109.23 +/- 14.97</td>
375 <td>1.17 +/- 2.12</td>
376 <td>3.01 +/- 1.73</td>
389 <td>109.94 +/- 12.23</td>
390 <td>1.48 +/- 2.32</td>
391 <td>2.30 +/- 2.47</td>
404 <td>115.81 +/- 11.51</td>
405 <td>2.09 +/- 1.67</td>
406 <td>1.19 +/- 2.91</td>
412 <a name="Lane"><h2>Lane 1</h2></a><table border="1" cellpadding="5">
414 <td colspan="1">Lane </td>
415 <td colspan="1">Tile</td>
416 <td colspan="1">Clusters (raw)</td>
417 <td colspan="1">Av 1st Cycle Int (PF)</td>
418 <td colspan="1">Av % intensity after 20 cycles (PF)</td>
419 <td colspan="1">% PF Clusters </td>
420 <td colspan="1">% Align (PF) </td>
421 <td colspan="1">Av Alignment Score (PF)</td>
422 <td colspan="1">% Error Rate (PF) </td>
1525 <a name="Lane"><h2>Lane 2</h2></a><table border="1" cellpadding="5">
1527 <td colspan="1">Lane </td>
1528 <td colspan="1">Tile</td>
1529 <td colspan="1">Clusters (raw)</td>
1530 <td colspan="1">Av 1st Cycle Int (PF)</td>
1531 <td colspan="1">Av % intensity after 20 cycles (PF)</td>
1532 <td colspan="1">% PF Clusters </td>
1533 <td colspan="1">% Align (PF) </td>
1534 <td colspan="1">Av Alignment Score (PF)</td>
1535 <td colspan="1">% Error Rate (PF) </td>
2638 <a name="Lane"><h2>Lane 3</h2></a><table border="1" cellpadding="5">
2640 <td colspan="1">Lane </td>
2641 <td colspan="1">Tile</td>
2642 <td colspan="1">Clusters (raw)</td>
2643 <td colspan="1">Av 1st Cycle Int (PF)</td>
2644 <td colspan="1">Av % intensity after 20 cycles (PF)</td>
2645 <td colspan="1">% PF Clusters </td>
2646 <td colspan="1">% Align (PF) </td>
2647 <td colspan="1">Av Alignment Score (PF)</td>
2648 <td colspan="1">% Error Rate (PF) </td>
3751 <a name="Lane"><h2>Lane 4</h2></a><table border="1" cellpadding="5">
3753 <td colspan="1">Lane </td>
3754 <td colspan="1">Tile</td>
3755 <td colspan="1">Clusters (raw)</td>
3756 <td colspan="1">Av 1st Cycle Int (PF)</td>
3757 <td colspan="1">Av % intensity after 20 cycles (PF)</td>
3758 <td colspan="1">% PF Clusters </td>
3759 <td colspan="1">% Align (PF) </td>
3760 <td colspan="1">Av Alignment Score (PF)</td>
3761 <td colspan="1">% Error Rate (PF) </td>
4864 <a name="Lane"><h2>Lane 5</h2></a><table border="1" cellpadding="5">
4866 <td colspan="1">Lane </td>
4867 <td colspan="1">Tile</td>
4868 <td colspan="1">Clusters (raw)</td>
4869 <td colspan="1">Av 1st Cycle Int (PF)</td>
4870 <td colspan="1">Av % intensity after 20 cycles (PF)</td>
4871 <td colspan="1">% PF Clusters </td>
4872 <td colspan="1">% Align (PF) </td>
4873 <td colspan="1">Av Alignment Score (PF)</td>
4874 <td colspan="1">% Error Rate (PF) </td>
5977 <a name="Lane"><h2>Lane 6</h2></a><table border="1" cellpadding="5">
5979 <td colspan="1">Lane </td>
5980 <td colspan="1">Tile</td>
5981 <td colspan="1">Clusters (raw)</td>
5982 <td colspan="1">Av 1st Cycle Int (PF)</td>
5983 <td colspan="1">Av % intensity after 20 cycles (PF)</td>
5984 <td colspan="1">% PF Clusters </td>
5985 <td colspan="1">% Align (PF) </td>
5986 <td colspan="1">Av Alignment Score (PF)</td>
5987 <td colspan="1">% Error Rate (PF) </td>
7090 <a name="Lane"><h2>Lane 7</h2></a><table border="1" cellpadding="5">
7092 <td colspan="1">Lane </td>
7093 <td colspan="1">Tile</td>
7094 <td colspan="1">Clusters (raw)</td>
7095 <td colspan="1">Av 1st Cycle Int (PF)</td>
7096 <td colspan="1">Av % intensity after 20 cycles (PF)</td>
7097 <td colspan="1">% PF Clusters </td>
7098 <td colspan="1">% Align (PF) </td>
7099 <td colspan="1">Av Alignment Score (PF)</td>
7100 <td colspan="1">% Error Rate (PF) </td>
8203 <a name="Lane"><h2>Lane 8</h2></a><table border="1" cellpadding="5">
8205 <td colspan="1">Lane </td>
8206 <td colspan="1">Tile</td>
8207 <td colspan="1">Clusters (raw)</td>
8208 <td colspan="1">Av 1st Cycle Int (PF)</td>
8209 <td colspan="1">Av % intensity after 20 cycles (PF)</td>
8210 <td colspan="1">% PF Clusters </td>
8211 <td colspan="1">% Align (PF) </td>
8212 <td colspan="1">Av Alignment Score (PF)</td>
8213 <td colspan="1">% Error Rate (PF) </td>
9316 <li><h3>IVC Plots</h3></li>
9317 <a href="../IVC.htm"> click here
9318 </a><h3><li>All Intensity Plots</li></h3>
9319 <a href="../All.htm"> click here
9320 </a><h3><li>Error Graphs</li></h3>
9321 <a href="Error.htm"> click here
9322 </a><h3><li>Error Curves</li></h3>
9323 <a href="Perfect.htm"> click here