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Initial port to python3
[htsworkflow.git]
/
encode_submission
/
geo_gather.py
diff --git
a/encode_submission/geo_gather.py
b/encode_submission/geo_gather.py
index 751264cc4276a658491c387852a180fff94929a0..20910f603d287d16fdc583905fecaa388e512aee 100644
(file)
--- a/
encode_submission/geo_gather.py
+++ b/
encode_submission/geo_gather.py
@@
-1,5
+1,5
@@
#!/usr/bin/env python
#!/usr/bin/env python
-from
ConfigP
arser import SafeConfigParser
+from
configp
arser import SafeConfigParser
import fnmatch
from glob import glob
import json
import fnmatch
from glob import glob
import json
@@
-9,14
+9,14
@@
from optparse import OptionParser, OptionGroup
import os
from pprint import pprint, pformat
import shlex
import os
from pprint import pprint, pformat
import shlex
-from
StringIO
import StringIO
+from
io
import StringIO
import stat
import sys
import time
import types
import stat
import sys
import time
import types
-import urllib
-import urllib
2
-import urlparse
+import urllib
.request, urllib.parse, urllib.error
+import urllib
.request, urllib.error, urllib.parse
+import url
lib.
parse
from zipfile import ZipFile
import RDF
from zipfile import ZipFile
import RDF
@@
-98,7
+98,7
@@
def main(cmdline=None):
if opts.print_rdf:
writer = get_serializer()
if opts.print_rdf:
writer = get_serializer()
- print
writer.serialize_model_to_string(model
)
+ print
(writer.serialize_model_to_string(model)
)
def make_parser():
def make_parser():