woldlab.caltech.edu Git - htsworkflow.git/commit

author	Diane Trout <diane@ghic.org>
	Tue, 13 Aug 2013 23:41:28 +0000 (16:41 -0700)
committer	Diane Trout <diane@ghic.org>
	Tue, 13 Aug 2013 23:41:28 +0000 (16:41 -0700)
commit	53ebb47e86e81ce349d4ef4e16aef94be93486ea
tree	54e7328c51e91b5bab3c10015ba6679c86ddf295	tree \| snapshot
parent	4262586d10cc0cc227390873b301b55244204c11	commit \| diff

Initial port to python3

120 files changed:

encode_submission/encode3.py		diff \| blob \| history
encode_submission/encode_find.py		diff \| blob \| history
encode_submission/geo_gather.py		diff \| blob \| history
encode_submission/scan_extension.py		diff \| blob \| history
encode_submission/submission_report.py		diff \| blob \| history
encode_submission/test_encode_find.py		diff \| blob \| history
encode_submission/test_ucsc_gather.py		diff \| blob \| history
encode_submission/ucsc_gather.py		diff \| blob \| history
htsworkflow/automation/copier.py		diff \| blob \| history
htsworkflow/automation/runner.py		diff \| blob \| history
htsworkflow/automation/spoolwatcher.py		diff \| blob \| history
htsworkflow/automation/test/test_runner.py		diff \| blob \| history
htsworkflow/automation/test/test_solexa_utils.py		diff \| blob \| history
htsworkflow/frontend/analysis/main.py		diff \| blob \| history
htsworkflow/frontend/auth.py		diff \| blob \| history
htsworkflow/frontend/bcmagic/models.py		diff \| blob \| history
htsworkflow/frontend/bcmagic/plugin.py		diff \| blob \| history
htsworkflow/frontend/bcmagic/utils.py		diff \| blob \| history
htsworkflow/frontend/bcmagic/views.py		diff \| blob \| history
htsworkflow/frontend/eland_config/forms.py		diff \| blob \| history
htsworkflow/frontend/eland_config/views.py		diff \| blob \| history
htsworkflow/frontend/experiments/admin.py		diff \| blob \| history
htsworkflow/frontend/experiments/experiments.py		diff \| blob \| history
htsworkflow/frontend/experiments/models.py		diff \| blob \| history
htsworkflow/frontend/experiments/test_experiments.py		diff \| blob \| history
htsworkflow/frontend/experiments/views.py		diff \| blob \| history
htsworkflow/frontend/inventory/models.py		diff \| blob \| history
htsworkflow/frontend/inventory/test_inventory.py		diff \| blob \| history
htsworkflow/frontend/inventory/views.py		diff \| blob \| history
htsworkflow/frontend/labels/models.py		diff \| blob \| history
htsworkflow/frontend/labels/test_labels.py		diff \| blob \| history
htsworkflow/frontend/reports/libinfopar.py		diff \| blob \| history
htsworkflow/frontend/reports/models.py		diff \| blob \| history
htsworkflow/frontend/reports/reports.py		diff \| blob \| history
htsworkflow/frontend/reports/utils.py		diff \| blob \| history
htsworkflow/frontend/samples/auth_backend.py		diff \| blob \| history
htsworkflow/frontend/samples/models.py		diff \| blob \| history
htsworkflow/frontend/samples/test_samples.py		diff \| blob \| history
htsworkflow/frontend/samples/views.py		diff \| blob \| history
htsworkflow/frontend/static/js/jquery.min.js	[new symlink]	blob
htsworkflow/pipelines/__init__.py		diff \| blob \| history
htsworkflow/pipelines/bustard.py		diff \| blob \| history
htsworkflow/pipelines/configure_run.py		diff \| blob \| history
htsworkflow/pipelines/desplit_fastq.py		diff \| blob \| history
htsworkflow/pipelines/eland.py		diff \| blob \| history
htsworkflow/pipelines/firecrest.py		diff \| blob \| history
htsworkflow/pipelines/genome_mapper.py		diff \| blob \| history
htsworkflow/pipelines/genomemap.py		diff \| blob \| history
htsworkflow/pipelines/gerald.py		diff \| blob \| history
htsworkflow/pipelines/ipar.py		diff \| blob \| history
htsworkflow/pipelines/qseq2fastq.py		diff \| blob \| history
htsworkflow/pipelines/retrieve_config.py		diff \| blob \| history
htsworkflow/pipelines/run_status.py		diff \| blob \| history
htsworkflow/pipelines/runfolder.py		diff \| blob \| history
htsworkflow/pipelines/sequences.py		diff \| blob \| history
htsworkflow/pipelines/srf.py		diff \| blob \| history
htsworkflow/pipelines/srf2fastq.py		diff \| blob \| history
htsworkflow/pipelines/summary.py		diff \| blob \| history
htsworkflow/pipelines/test/simulate_runfolder.py		diff \| blob \| history
htsworkflow/pipelines/test/test_eland.py		diff \| blob \| history
htsworkflow/pipelines/test/test_extract_results.py		diff \| blob \| history
htsworkflow/pipelines/test/test_genome_mapper.py		diff \| blob \| history
htsworkflow/pipelines/test/test_genomemap.py		diff \| blob \| history
htsworkflow/pipelines/test/test_retrive_config.py		diff \| blob \| history
htsworkflow/pipelines/test/test_run_xml.py		diff \| blob \| history
htsworkflow/pipelines/test/test_runfolder026.py		diff \| blob \| history
htsworkflow/pipelines/test/test_runfolder030.py		diff \| blob \| history
htsworkflow/pipelines/test/test_runfolder110.py		diff \| blob \| history
htsworkflow/pipelines/test/test_runfolder_casava_1_7.py		diff \| blob \| history
htsworkflow/pipelines/test/test_runfolder_ipar100.py		diff \| blob \| history
htsworkflow/pipelines/test/test_runfolder_ipar130.py		diff \| blob \| history
htsworkflow/pipelines/test/test_runfolder_pair.py		diff \| blob \| history
htsworkflow/pipelines/test/test_runfolder_rta.py		diff \| blob \| history
htsworkflow/pipelines/test/test_runfolder_rta160.py		diff \| blob \| history
htsworkflow/pipelines/test/test_runfolder_rta180.py		diff \| blob \| history
htsworkflow/pipelines/test/test_runfolder_rta1_12.py		diff \| blob \| history
htsworkflow/pipelines/test/test_runfolder_utils.py		diff \| blob \| history
htsworkflow/pipelines/test/test_samplekey.py		diff \| blob \| history
htsworkflow/pipelines/test/test_sequences.py		diff \| blob \| history
htsworkflow/pipelines/test/test_summary.py		diff \| blob \| history
htsworkflow/settings.py		diff \| blob \| history
htsworkflow/submission/condorfastq.py		diff \| blob \| history
htsworkflow/submission/daf.py		diff \| blob \| history
htsworkflow/submission/fastqname.py		diff \| blob \| history
htsworkflow/submission/geo.py		diff \| blob \| history
htsworkflow/submission/ncbi.py		diff \| blob \| history
htsworkflow/submission/submission.py		diff \| blob \| history
htsworkflow/submission/test/test_condorfastq.py		diff \| blob \| history
htsworkflow/submission/test/test_daf.py		diff \| blob \| history
htsworkflow/submission/test/test_fastqname.py		diff \| blob \| history
htsworkflow/submission/test/test_results.py		diff \| blob \| history
htsworkflow/submission/test/test_submission.py		diff \| blob \| history
htsworkflow/submission/test/test_ucsc.py		diff \| blob \| history
htsworkflow/submission/trackhub_submission.py		diff \| blob \| history
htsworkflow/submission/ucsc.py		diff \| blob \| history
htsworkflow/util/alphanum.py		diff \| blob \| history
htsworkflow/util/api.py		diff \| blob \| history
htsworkflow/util/conversion.py		diff \| blob \| history
htsworkflow/util/fctracker.py		diff \| blob \| history
htsworkflow/util/hdquery.py		diff \| blob \| history
htsworkflow/util/opener.py		diff \| blob \| history
htsworkflow/util/queuecommands.py		diff \| blob \| history
htsworkflow/util/rdfhelp.py		diff \| blob \| history
htsworkflow/util/test/test_alphanum.py		diff \| blob \| history
htsworkflow/util/test/test_api.py		diff \| blob \| history
htsworkflow/util/test/test_conversion.py		diff \| blob \| history
htsworkflow/util/test/test_ethelp.py		diff \| blob \| history
htsworkflow/util/test/test_makebed.py		diff \| blob \| history
htsworkflow/util/test/test_queuecommands.py		diff \| blob \| history
htsworkflow/util/test/test_rdfhelp.py		diff \| blob \| history
htsworkflow/util/test/test_rdfinfer.py		diff \| blob \| history
htsworkflow/util/test/test_url.py		diff \| blob \| history
htsworkflow/util/test/test_validate.py		diff \| blob \| history
htsworkflow/util/test/test_version.py		diff \| blob \| history
htsworkflow/util/validate.py		diff \| blob \| history
htsworkflow/util/version.py		diff \| blob \| history
scripts/rerun_eland.py		diff \| blob \| history
test/test_copier.py		diff \| blob \| history
test/test_srf2fastq.py		diff \| blob \| history
test/tree.py		diff \| blob \| history

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