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Initial port to python3
[htsworkflow.git]
/
htsworkflow
/
pipelines
/
srf.py
diff --git
a/htsworkflow/pipelines/srf.py
b/htsworkflow/pipelines/srf.py
index 5a6c969bd768aa09fab68e005f9ef5caae7ffcea..94445b600f2232b60bf35d35224934e89b5db389 100644
(file)
--- a/
htsworkflow/pipelines/srf.py
+++ b/
htsworkflow/pipelines/srf.py
@@
-111,7
+111,7
@@
def create_qseq_patterns(bustard_dir):
qseq_patterns = []
# grab a lane from the dictionary
# I don't think it matters which one.
- k = l
anes.keys(
)[0]
+ k = l
ist(lanes.keys()
)[0]
# build the list of patterns
for read in lanes[k]:
read = int(read)