from optparse import OptionParser
import sys
-from htsworkflow.version import version
+from htsworkflow.util.version import version
from htsworkflow.util.opener import autoopen
from htsworkflow.util.conversion import parse_slice
opts, args = parser.parse_args(cmdline)
if opts.version:
- print (version())
+ print((version()))
return 0
- if opts.output is None:
+ if opts.output is not None:
output = open(opts.output, 'w')
else:
output = sys.stdout