Use sample keys when looking up lane parameters.

[htsworkflow.git] / htsworkflow / pipelines / eland.py

diff --git a/htsworkflow/pipelines/eland.py b/htsworkflow/pipelines/eland.py
index 873dbefeb8d2e633a80500c632119b8451e26aed..19905bc8da526996924f592d15120865b5c1747b 100644 (file)
--- a/htsworkflow/pipelines/eland.py
+++ b/htsworkflow/pipelines/eland.py
@@ -716,7 +716,7 @@ class ELAND(collections.MutableMapping):
         if genome_maps is not None:
             genome_map = genome_maps[key.lane]
         elif gerald is not None:
-            genome_dir = gerald.lanes[key.lane].eland_genome
+            genome_dir = gerald.lanes[key].eland_genome
             if genome_dir is not None:
                 genome_map = build_genome_fasta_map(genome_dir)