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Recent IPAR xml config blocks include the runfolder name
[htsworkflow.git]
/
htsworkflow
/
pipelines
/
runfolder.py
diff --git
a/htsworkflow/pipelines/runfolder.py
b/htsworkflow/pipelines/runfolder.py
index 7c06e217de63d5733e524ae551f06eea40528e11..26c592ce5f7eb6d65175031f9c9010dc400d9410 100644
(file)
--- a/
htsworkflow/pipelines/runfolder.py
+++ b/
htsworkflow/pipelines/runfolder.py
@@
-129,10
+129,12
@@
class PipelineRun(object):
return path_fields[-1]
def _get_runfolder_name(self):
return path_fields[-1]
def _get_runfolder_name(self):
- if self.gerald is None:
- return None
- else:
+ if self.gerald:
return self.gerald.runfolder_name
return self.gerald.runfolder_name
+ elif hasattr(self.image_analysis, 'runfolder_name'):
+ return self.image_analysis.runfolder_name
+ else:
+ return None
runfolder_name = property(_get_runfolder_name)
def _get_run_dirname(self):
runfolder_name = property(_get_runfolder_name)
def _get_run_dirname(self):